LINC02555

Summary

LINC02555 (long intergenic non-protein coding RNA 2555, HGNC:53593) is a long non-coding RNA gene on chromosome 12q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53593
Approved symbol	LINC02555
Name	long intergenic non-protein coding RNA 2555
Location	12q12
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC079630.2
Ensembl gene	ENSG00000260943
Ensembl biotype	lncRNA
Entrez	101930164
RNAcentral	URS00000ED9FC — lncRNA, 1951 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000563933, ENST00000783275, ENST00000783276

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563933 — 1 exons

Exon	Start	End
ENSE00002589573	40140926	40142876

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 82.15.

Top tissues by expression

180 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.15	silver quality
lower lobe of lung	UBERON:0008949	70.55	gold quality
upper lobe of lung	UBERON:0008948	65.43	gold quality
upper lobe of left lung	UBERON:0008952	65.19	gold quality
lung	UBERON:0002048	64.60	gold quality
leukocyte	CL:0000738	61.86	gold quality
right lung	UBERON:0002167	61.39	gold quality
monocyte	CL:0000576	61.28	gold quality
blood	UBERON:0000178	59.69	gold quality
granulocyte	CL:0000094	57.94	gold quality
vermiform appendix	UBERON:0001154	56.89	gold quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.68	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
epithelial cell of pancreas	CL:0000083	52.93	gold quality
caecum	UBERON:0001153	52.62	gold quality
gastrocnemius	UBERON:0001388	51.09	silver quality
ileal mucosa	UBERON:0000331	50.66	silver quality
lymph node	UBERON:0000029	50.40	gold quality
myocardium	UBERON:0002349	50.25	gold quality
right lobe of thyroid gland	UBERON:0001119	49.39	gold quality
tibialis anterior	UBERON:0001385	49.04	silver quality
spleen	UBERON:0002106	47.77	gold quality
Brodmann (1909) area 9	UBERON:0013540	47.60	silver quality
pancreas	UBERON:0001264	47.44	gold quality
anatomical system	UBERON:0000467	47.15	gold quality
nasal cavity epithelium	UBERON:0005384	47.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	8.35

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.