LINC02556

Summary

LINC02556 (long intergenic non-protein coding RNA 2556, HGNC:53595) is a long non-coding RNA gene on chromosome 22q11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53595
Approved symbol	LINC02556
Name	long intergenic non-protein coding RNA 2556
Location	22q11.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236611
Ensembl biotype	lncRNA
Entrez	102724679
RNAcentral	URS00002698E5 — lncRNA, 346 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000450776

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450776 — 2 exons

Exon	Start	End
ENSE00001710203	23328324	23328493
ENSE00001785308	23326616	23326791

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 93.81.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.81	gold quality
bone marrow cell	CL:0002092	73.15	silver quality
cortical plate	UBERON:0005343	67.76	gold quality
bone marrow	UBERON:0002371	67.68	gold quality
skeletal muscle tissue	UBERON:0001134	63.92	gold quality
lymph node	UBERON:0000029	62.15	gold quality
monocyte	CL:0000576	60.08	gold quality
prefrontal cortex	UBERON:0000451	59.71	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.64	gold quality
superior frontal gyrus	UBERON:0002661	58.92	gold quality
smooth muscle tissue	UBERON:0001135	58.29	gold quality
islet of Langerhans	UBERON:0000006	57.33	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.96	gold quality
primary visual cortex	UBERON:0002436	56.71	gold quality
cerebellum	UBERON:0002037	55.98	gold quality
cerebellar cortex	UBERON:0002129	55.86	gold quality
liver	UBERON:0002107	55.67	gold quality
cerebellar hemisphere	UBERON:0002245	55.58	gold quality
muscle of leg	UBERON:0001383	55.38	gold quality
blood	UBERON:0000178	55.37	gold quality
right hemisphere of cerebellum	UBERON:0014890	55.04	gold quality
lower esophagus mucosa	UBERON:0035834	55.00	gold quality
gastrocnemius	UBERON:0001388	54.92	gold quality
tibial artery	UBERON:0007610	54.73	gold quality
right lobe of liver	UBERON:0001114	54.20	gold quality
ascending aorta	UBERON:0001496	53.97	gold quality
adult mammalian kidney	UBERON:0000082	53.94	gold quality
thoracic aorta	UBERON:0001515	53.69	gold quality
kidney	UBERON:0002113	53.45	gold quality
pancreas	UBERON:0001264	53.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.