LINC02559

Summary

LINC02559 (long intergenic non-protein coding RNA 2559, HGNC:53598) is a long non-coding RNA gene on chromosome 22q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53598
Approved symbol	LINC02559
Name	long intergenic non-protein coding RNA 2559
Location	22q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236464
Ensembl biotype	lncRNA
Entrez	105372972
RNAcentral	URS0002A690A8 — lncRNA, 515 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000420391, ENST00000839790, ENST00000839791, ENST00000839792, ENST00000839793

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000420391 — 2 exons

Exon	Start	End
ENSE00001795562	26164162	26164303
ENSE00004262393	26161677	26161879

Expression profiles

Bgee: expression breadth broad, 44 present calls, max score 73.19.

Top tissues by expression

44 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	73.19	gold quality
cortex of kidney	UBERON:0001225	71.86	gold quality
muscle of leg	UBERON:0001383	66.07	gold quality
islet of Langerhans	UBERON:0000006	66.06	gold quality
gastrocnemius	UBERON:0001388	65.55	gold quality
tibial nerve	UBERON:0001323	65.06	gold quality
blood	UBERON:0000178	64.54	gold quality
right testis	UBERON:0004534	64.08	gold quality
heart left ventricle	UBERON:0002084	63.29	gold quality
left testis	UBERON:0004533	61.39	gold quality
testis	UBERON:0000473	61.32	gold quality
ascending aorta	UBERON:0001496	60.80	gold quality
body of pancreas	UBERON:0001150	59.43	gold quality
left coronary artery	UBERON:0001626	59.00	gold quality
lower esophagus muscularis layer	UBERON:0035833	58.78	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	58.39	gold quality
hypothalamus	UBERON:0001898	57.76	gold quality
adrenal gland	UBERON:0002369	57.01	gold quality
muscle layer of sigmoid colon	UBERON:0035805	56.95	gold quality
skin of abdomen	UBERON:0001416	56.71	gold quality
left adrenal gland	UBERON:0001234	56.27	gold quality
tibial artery	UBERON:0007610	56.25	gold quality
anterior cingulate cortex	UBERON:0009835	55.95	gold quality
nucleus accumbens	UBERON:0001882	55.34	gold quality
cerebellar hemisphere	UBERON:0002245	55.12	gold quality
substantia nigra	UBERON:0002038	55.09	gold quality
minor salivary gland	UBERON:0001830	54.93	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.86	gold quality
putamen	UBERON:0001874	54.63	gold quality
subcutaneous adipose tissue	UBERON:0002190	54.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.