LINC02565

Summary

LINC02565 (long intergenic non-protein coding RNA 2565, HGNC:53605) is a long non-coding RNA gene on chromosome 18q21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53605
Approved symbol	LINC02565
Name	long intergenic non-protein coding RNA 2565
Location	18q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267726
Ensembl biotype	lncRNA
Entrez	105372138
RNAcentral	URS0000587BBE — lncRNA, 478 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000592678

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000592678 — 2 exons

Exon	Start	End
ENSE00002741758	57171133	57171194
ENSE00002856905	57169615	57170030

Expression profiles

Bgee: expression breadth broad, 45 present calls, max score 88.74.

Top tissues by expression

45 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
gall bladder	UBERON:0002110	88.74	gold quality
cortex of kidney	UBERON:0001225	69.12	gold quality
right lobe of liver	UBERON:0001114	68.95	gold quality
liver	UBERON:0002107	67.61	gold quality
duodenum	UBERON:0002114	64.12	gold quality
spleen	UBERON:0002106	64.11	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.28	gold quality
intestine	UBERON:0000160	59.51	gold quality
small intestine	UBERON:0002108	58.98	gold quality
islet of Langerhans	UBERON:0000006	58.26	gold quality
prefrontal cortex	UBERON:0000451	56.16	gold quality
blood	UBERON:0000178	53.26	gold quality
colon	UBERON:0001155	52.99	gold quality
multicellular organism	UBERON:0000468	51.60	gold quality
tibial artery	UBERON:0007610	49.98	gold quality
monocyte	CL:0000576	48.86	silver quality
body of pancreas	UBERON:0001150	48.21	gold quality
gastrocnemius	UBERON:0001388	47.10	silver quality
ascending aorta	UBERON:0001496	45.73	gold quality
small intestine Peyer’s patch	UBERON:0003454	44.91	gold quality
right frontal lobe	UBERON:0002810	44.50	silver quality
cerebellar hemisphere	UBERON:0002245	44.34	silver quality
right hemisphere of cerebellum	UBERON:0014890	43.19	gold quality
thyroid gland	UBERON:0002046	43.16	gold quality
prostate gland	UBERON:0002367	42.90	gold quality
caudate nucleus	UBERON:0001873	42.75	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	42.10	gold quality
vagina	UBERON:0000996	42.08	silver quality
endometrium	UBERON:0001295	42.08	silver quality
hypothalamus	UBERON:0001898	41.35	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.