LINC02572

Summary

LINC02572 (long intergenic non-protein coding RNA 2572, HGNC:53634) is a long non-coding RNA gene on chromosome 2q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53634
Approved symbol	LINC02572
Name	long intergenic non-protein coding RNA 2572
Location	2q21.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC079776.2
Ensembl gene	ENSG00000229536
Ensembl biotype	lncRNA
Entrez	105373615
RNAcentral	URS0000BC441C — lncRNA, 1445 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 33 — 33 lncRNA

ENST00000450531, ENST00000641154, ENST00000654914, ENST00000666679, ENST00000669319, ENST00000809995, ENST00000809996, ENST00000809997, ENST00000809998, ENST00000809999, ENST00000810000, ENST00000810001, ENST00000810002, ENST00000810003, ENST00000810004, ENST00000810005, ENST00000810006, ENST00000810007, ENST00000810008, ENST00000810009, ENST00000810010, ENST00000810011, ENST00000810012, ENST00000810013, ENST00000810014, ENST00000810015, ENST00000810016, ENST00000810017, ENST00000810018, ENST00000810019, ENST00000810020, ENST00000810021, ENST00000810022

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450531 — 2 exons

Exon	Start	End
ENSE00004206420	129868135	129869535
ENSE00004206439	129877334	129877566

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 78.71.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.71	gold quality
ganglionic eminence	UBERON:0004023	64.05	gold quality
ventricular zone	UBERON:0003053	63.34	gold quality
cortical plate	UBERON:0005343	58.95	silver quality
monocyte	CL:0000576	57.55	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.53	gold quality
leukocyte	CL:0000738	57.26	gold quality
calcaneal tendon	UBERON:0003701	56.94	gold quality
islet of Langerhans	UBERON:0000006	54.24	gold quality
gall bladder	UBERON:0002110	54.22	gold quality
sural nerve	UBERON:0015488	53.97	silver quality
prefrontal cortex	UBERON:0000451	52.47	gold quality
lymph node	UBERON:0000029	51.95	gold quality
superior frontal gyrus	UBERON:0002661	51.71	gold quality
skeletal muscle tissue	UBERON:0001134	51.37	silver quality
liver	UBERON:0002107	51.20	silver quality
pancreas	UBERON:0001264	50.65	gold quality
right uterine tube	UBERON:0001302	50.50	gold quality
primary visual cortex	UBERON:0002436	50.00	silver quality
bone marrow	UBERON:0002371	49.91	silver quality
fallopian tube	UBERON:0003889	49.38	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.32	gold quality
adenohypophysis	UBERON:0002196	48.54	gold quality
muscle of leg	UBERON:0001383	48.11	silver quality
body of pancreas	UBERON:0001150	48.02	gold quality
right adrenal gland	UBERON:0001233	47.85	gold quality
blood	UBERON:0000178	47.71	silver quality
right lobe of liver	UBERON:0001114	47.55	silver quality
frontal cortex	UBERON:0001870	47.53	gold quality
placenta	UBERON:0001987	47.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.