LINC02573

Summary

LINC02573 (long intergenic non-protein coding RNA 2573, HGNC:53730) is a long non-coding RNA gene on chromosome 21q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53730
Approved symbol	LINC02573
Name	long intergenic non-protein coding RNA 2573
Location	21q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233236
Ensembl biotype	lncRNA
Entrez	111216285
RNAcentral	URS0000CCDF9F — lncRNA, 619 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000436373, ENST00000746617

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000436373 — 2 exons

Exon	Start	End
ENSE00001598199	20256752	20257346
ENSE00001642062	20258552	20258820

Expression profiles

Bgee: expression breadth broad, 34 present calls, max score 72.52.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.4736 / max 95.5561, expressed in 53 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
189898	0.2036	35
189896	0.1224	34
189897	0.0816	28
189895	0.0660	23

Top tissues by expression

160 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of paranasal sinus	UBERON:0005030	72.52	gold quality
epithelium of nasopharynx	UBERON:0001951	71.73	gold quality
vena cava	UBERON:0004087	69.55	gold quality
visceral pleura	UBERON:0002401	67.15	gold quality
parietal pleura	UBERON:0002400	67.03	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	66.50	gold quality
bone marrow	UBERON:0002371	66.30	gold quality
prefrontal cortex	UBERON:0000451	65.85	gold quality
germinal epithelium of ovary	UBERON:0001304	65.84	gold quality
secondary oocyte	CL:0000655	65.37	gold quality
coronary artery	UBERON:0001621	65.35	gold quality
adult mammalian kidney	UBERON:0000082	65.04	gold quality
cardia of stomach	UBERON:0001162	64.77	gold quality
cerebellar vermis	UBERON:0004720	64.72	gold quality
pylorus	UBERON:0001166	64.55	gold quality
nipple	UBERON:0002030	64.44	gold quality
bone marrow cell	CL:0002092	64.32	silver quality
superior surface of tongue	UBERON:0007371	64.07	gold quality
corpus callosum	UBERON:0002336	63.99	gold quality
pharyngeal mucosa	UBERON:0000355	63.95	gold quality
cerebellar hemisphere	UBERON:0002245	63.80	gold quality
trabecular bone tissue	UBERON:0002483	63.65	gold quality
ventral tegmental area	UBERON:0002691	63.61	gold quality
trachea	UBERON:0003126	63.61	gold quality
saphenous vein	UBERON:0007318	63.61	gold quality
tongue	UBERON:0001723	63.52	gold quality
body of tongue	UBERON:0011876	63.50	gold quality
quadriceps femoris	UBERON:0001377	63.46	gold quality
synovial joint	UBERON:0002217	63.46	silver quality
vastus lateralis	UBERON:0001379	63.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.89

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.