LINC02578

Summary

LINC02578 (long intergenic non-protein coding RNA 2578, HGNC:53750) is a long non-coding RNA gene on chromosome 9q33.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53750
Approved symbol	LINC02578
Name	long intergenic non-protein coding RNA 2578
Location	9q33.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-127L21.1
Ensembl gene	ENSG00000235201
Ensembl biotype	lncRNA
Entrez	111216287
RNAcentral	URS0000CCE136 — lncRNA, 429 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000456032

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000456032 — 2 exons

Exon	Start	End
ENSE00001663495	118740563	118740649
ENSE00001735044	118745144	118745312

Expression profiles

Bgee: expression breadth broad, 23 present calls, max score 72.64.

Top tissues by expression

23 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
heart left ventricle	UBERON:0002084	72.64	gold quality
monocyte	CL:0000576	67.22	gold quality
blood	UBERON:0000178	64.33	gold quality
gastrocnemius	UBERON:0001388	62.25	gold quality
putamen	UBERON:0001874	56.76	gold quality
anterior cingulate cortex	UBERON:0009835	54.44	gold quality
ascending aorta	UBERON:0001496	53.12	gold quality
hypothalamus	UBERON:0001898	52.72	gold quality
minor salivary gland	UBERON:0001830	51.67	gold quality
lower esophagus muscularis layer	UBERON:0035833	51.32	gold quality
esophagus mucosa	UBERON:0002469	50.92	gold quality
right frontal lobe	UBERON:0002810	49.98	gold quality
stomach	UBERON:0000945	49.52	gold quality
prostate gland	UBERON:0002367	48.84	gold quality
subcutaneous adipose tissue	UBERON:0002190	48.77	gold quality
left coronary artery	UBERON:0001626	48.52	gold quality
caudate nucleus	UBERON:0001873	46.85	gold quality
nucleus accumbens	UBERON:0001882	45.61	gold quality
skin of leg	UBERON:0001511	43.84	gold quality
adult mammalian kidney	UBERON:0000082	42.60	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	36.13	silver quality
lung	UBERON:0002048	35.56	silver quality
left testis	UBERON:0004533	29.62	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.