LINC02593

Summary

LINC02593 (long intergenic non-protein coding RNA 2593, HGNC:53933) is a long non-coding RNA gene on chromosome 1p36.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53933
Approved symbol	LINC02593
Name	long intergenic non-protein coding RNA 2593
Location	1p36.33
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL645608.1
Ensembl gene	ENSG00000223764
Ensembl biotype	lncRNA
Entrez	100130417
RNAcentral	URS000075EEDF — lncRNA, 1506 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 6 lncRNA, 2 retained_intron

ENST00000417705, ENST00000432961, ENST00000609207, ENST00000756700, ENST00000756701, ENST00000756702, ENST00000756703, ENST00000756704

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417705 — 4 exons

Exon	Start	End
ENSE00001655884	919335	919692
ENSE00001702311	918022	918110
ENSE00001739486	918825	918915
ENSE00001764582	916870	917720

Expression profiles

Bgee: expression breadth ubiquitous, 153 present calls, max score 96.36.

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	96.36	silver quality
stromal cell of endometrium	CL:0002255	75.76	gold quality
right atrium auricular region	UBERON:0006631	75.35	gold quality
pituitary gland	UBERON:0000007	74.62	gold quality
spleen	UBERON:0002106	74.47	gold quality
cardiac atrium	UBERON:0002081	74.46	gold quality
tendon of biceps brachii	UBERON:0008188	73.93	silver quality
left uterine tube	UBERON:0001303	73.78	gold quality
adenohypophysis	UBERON:0002196	73.65	gold quality
mucosa of stomach	UBERON:0001199	73.57	gold quality
prostate gland	UBERON:0002367	72.99	gold quality
tibial artery	UBERON:0007610	72.82	gold quality
popliteal artery	UBERON:0002250	72.79	gold quality
descending thoracic aorta	UBERON:0002345	72.72	gold quality
left adrenal gland cortex	UBERON:0035825	71.72	gold quality
metanephros cortex	UBERON:0010533	70.71	gold quality
right adrenal gland cortex	UBERON:0035827	70.61	gold quality
aorta	UBERON:0000947	70.33	gold quality
right adrenal gland	UBERON:0001233	70.21	gold quality
left adrenal gland	UBERON:0001234	70.18	gold quality
cortical plate	UBERON:0005343	70.05	gold quality
adrenal cortex	UBERON:0001235	69.65	gold quality
lower esophagus	UBERON:0013473	68.80	gold quality
lower esophagus muscularis layer	UBERON:0035833	68.78	gold quality
adrenal gland	UBERON:0002369	68.47	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	67.86	gold quality
lower esophagus mucosa	UBERON:0035834	67.79	gold quality
adult mammalian kidney	UBERON:0000082	67.64	gold quality
ascending aorta	UBERON:0001496	67.42	gold quality
thoracic aorta	UBERON:0001515	67.38	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.