LINC02600

Summary

LINC02600 (long intergenic non-protein coding RNA 2600, HGNC:53177) is a long non-coding RNA gene on chromosome 4p16.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53177
Approved symbol	LINC02600
Name	long intergenic non-protein coding RNA 2600
Location	4p16.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC141928.1
Ensembl gene	ENSG00000250986
Ensembl biotype	lncRNA
Entrez	107986251
RNAcentral	URS000016BB36 — lncRNA, 4525 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000511928

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000511928 — 2 exons

Exon	Start	End
ENSE00002021957	3758748	3760026
ENSE00002082112	3760145	3763390

Expression profiles

Bgee: expression breadth ubiquitous, 145 present calls, max score 84.91.

Top tissues by expression

238 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
kidney epithelium	UBERON:0004819	84.91	gold quality
stromal cell of endometrium	CL:0002255	80.88	gold quality
endocervix	UBERON:0000458	79.93	gold quality
descending thoracic aorta	UBERON:0002345	79.03	gold quality
thoracic aorta	UBERON:0001515	78.06	gold quality
ascending aorta	UBERON:0001496	77.95	gold quality
saphenous vein	UBERON:0007318	77.36	silver quality
epithelial cell of pancreas	CL:0000083	77.32	gold quality
aorta	UBERON:0000947	77.31	gold quality
popliteal artery	UBERON:0002250	76.78	gold quality
tibial artery	UBERON:0007610	76.74	gold quality
vena cava	UBERON:0004087	76.02	gold quality
uterine cervix	UBERON:0000002	74.50	gold quality
cardia of stomach	UBERON:0001162	74.19	gold quality
pharyngeal mucosa	UBERON:0000355	74.07	gold quality
body of tongue	UBERON:0011876	73.80	gold quality
cortical plate	UBERON:0005343	73.58	gold quality
ectocervix	UBERON:0012249	73.56	gold quality
right coronary artery	UBERON:0001625	73.01	gold quality
myometrium	UBERON:0001296	72.84	gold quality
tongue	UBERON:0001723	72.82	gold quality
ventral tegmental area	UBERON:0002691	72.79	gold quality
body of uterus	UBERON:0009853	72.72	gold quality
subthalamic nucleus	UBERON:0001906	72.60	gold quality
superior surface of tongue	UBERON:0007371	72.36	gold quality
dorsal plus ventral thalamus	UBERON:0001897	72.22	gold quality
inferior vagus X ganglion	UBERON:0005363	72.19	gold quality
putamen	UBERON:0001874	72.18	gold quality
trachea	UBERON:0003126	72.11	gold quality
pericardium	UBERON:0002407	72.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.