LINC02602

Summary

LINC02602 (long intergenic non-protein coding RNA 2602, HGNC:53968) is a long non-coding RNA gene on chromosome 1q32.2.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53968
Approved symbol	LINC02602
Name	long intergenic non-protein coding RNA 2602
Location	1q32.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00001798
Entrez	107985257
RNAcentral	URS00026A1C43 — lncRNA, 391 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000061574 (1:210291681 A>G), RS1000108463 (1:210292523 C>A,G), RS1001016126 (1:210293334 C>A,G), RS1001754942 (1:210290376 G>T), RS1001779242 (1:210293628 C>T), RS1001790571 (1:210293921 G>A), RS1002118140 (1:210294761 C>T), RS1002527438 (1:210293672 C>A,G,T), RS1003324056 (1:210289463 G>A), RS1003464519 (1:210295203 G>T), RS1004100751 (1:210292674 G>T), RS1004151668 (1:210292436 T>A,G), RS1005824542 (1:210291130 C>T), RS1006035871 (1:210294335 T>C), RS1006711489 (1:210294073 G>A)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.