LINC02613

Summary

LINC02613 (long intergenic non-protein coding RNA 2613, HGNC:54068) is a long non-coding RNA gene on chromosome 2p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54068
Approved symbol	LINC02613
Name	long intergenic non-protein coding RNA 2613
Location	2p22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231367
Ensembl biotype	lncRNA
Entrez	101929596
RNAcentral	URS000075B9E5 — lncRNA, 1147 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 21 — 21 lncRNA

ENST00000413227, ENST00000417039, ENST00000421463, ENST00000437979, ENST00000438085, ENST00000605062, ENST00000658016, ENST00000659803, ENST00000661472, ENST00000667944, ENST00000669322, ENST00000669429, ENST00000671178, ENST00000737774, ENST00000737775, ENST00000737776, ENST00000737777, ENST00000737778, ENST00000737779, ENST00000737780, ENST00000738607

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413227 — 6 exons

Exon	Start	End
ENSE00001606418	38482959	38483156
ENSE00001633575	38462903	38462971
ENSE00001733221	38469244	38469441
ENSE00001770651	38458637	38458875
ENSE00001804775	38496275	38496478
ENSE00003859301	38515447	38515934

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 87.83.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	87.83	silver quality
quadriceps femoris	UBERON:0001377	82.74	gold quality
muscle layer of sigmoid colon	UBERON:0035805	77.91	gold quality
hindlimb stylopod muscle	UBERON:0004252	76.77	gold quality
cerebellar vermis	UBERON:0004720	76.75	gold quality
thoracic mammary gland	UBERON:0005200	75.96	gold quality
skeletal muscle tissue	UBERON:0001134	75.85	gold quality
muscle tissue	UBERON:0002385	75.61	gold quality
body of uterus	UBERON:0009853	75.11	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.77	gold quality
myometrium	UBERON:0001296	74.39	gold quality
tonsil	UBERON:0002372	73.19	gold quality
sural nerve	UBERON:0015488	72.98	gold quality
mucosa of stomach	UBERON:0001199	72.92	gold quality
smooth muscle tissue	UBERON:0001135	72.66	gold quality
left uterine tube	UBERON:0001303	72.16	gold quality
lower esophagus mucosa	UBERON:0035834	71.99	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.72	gold quality
muscle of leg	UBERON:0001383	71.59	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	71.35	gold quality
skin of leg	UBERON:0001511	70.87	gold quality
gastrocnemius	UBERON:0001388	70.82	gold quality
lower esophagus	UBERON:0013473	70.78	gold quality
lower esophagus muscularis layer	UBERON:0035833	70.77	gold quality
zone of skin	UBERON:0000014	70.66	gold quality
skin of abdomen	UBERON:0001416	70.52	gold quality
left ovary	UBERON:0002119	69.93	gold quality
descending thoracic aorta	UBERON:0002345	69.89	gold quality
ovary	UBERON:0000992	69.83	gold quality
right ovary	UBERON:0002118	69.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.