LINC02615

Summary

LINC02615 (long intergenic non-protein coding RNA 2615, HGNC:53402) is a long non-coding RNA gene on chromosome 4q28.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53402
Approved symbol	LINC02615
Name	long intergenic non-protein coding RNA 2615
Location	4q28.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251432
Ensembl biotype	lncRNA
Entrez	100507487
RNAcentral	URS00007E40B4 — lncRNA, 2081 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 44 — 44 lncRNA

ENST00000504984, ENST00000505133, ENST00000509834, ENST00000511497, ENST00000513851, ENST00000662621, ENST00000663973, ENST00000667326, ENST00000693730, ENST00000816105, ENST00000816106, ENST00000816107, ENST00000816108, ENST00000816109, ENST00000816110, ENST00000816111, ENST00000816112, ENST00000816113, ENST00000816114, ENST00000816115, ENST00000816116, ENST00000816117, ENST00000816118, ENST00000816119, ENST00000816120, ENST00000816121, ENST00000816122, ENST00000816123, ENST00000816124, ENST00000816125, ENST00000816126, ENST00000816127, ENST00000816128, ENST00000816129, ENST00000816130, ENST00000816131, ENST00000816132, ENST00000816133, ENST00000816134, ENST00000816135, ENST00000816136, ENST00000816137, ENST00000816138, ENST00000816139

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504984 — 4 exons

Exon	Start	End
ENSE00002024645	128466608	128466772
ENSE00002045694	128470050	128470216
ENSE00004218525	128455126	128455282
ENSE00004218567	128470352	128471624

Expression profiles

Bgee: expression breadth ubiquitous, 171 present calls, max score 87.37.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2428 / max 16.9544, expressed in 112 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
49632	0.2428	112

Top tissues by expression

252 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	87.37	gold quality
pancreatic ductal cell	CL:0002079	84.12	silver quality
right adrenal gland cortex	UBERON:0035827	83.18	gold quality
right adrenal gland	UBERON:0001233	82.70	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.62	gold quality
left adrenal gland cortex	UBERON:0035825	81.91	gold quality
skin of abdomen	UBERON:0001416	81.63	gold quality
left adrenal gland	UBERON:0001234	81.48	gold quality
right lobe of thyroid gland	UBERON:0001119	81.37	gold quality
left lobe of thyroid gland	UBERON:0001120	81.19	gold quality
thyroid gland	UBERON:0002046	81.15	gold quality
adrenal cortex	UBERON:0001235	80.24	gold quality
skin of leg	UBERON:0001511	80.11	gold quality
upper lobe of left lung	UBERON:0008952	80.04	gold quality
right lung	UBERON:0002167	80.02	gold quality
colonic epithelium	UBERON:0000397	79.48	gold quality
body of pancreas	UBERON:0001150	79.46	gold quality
upper lobe of lung	UBERON:0008948	78.97	gold quality
adenohypophysis	UBERON:0002196	78.76	gold quality
adrenal gland	UBERON:0002369	78.75	gold quality
apex of heart	UBERON:0002098	77.65	gold quality
vagina	UBERON:0000996	77.63	gold quality
pituitary gland	UBERON:0000007	77.52	gold quality
zone of skin	UBERON:0000014	77.49	gold quality
esophagus mucosa	UBERON:0002469	77.47	gold quality
metanephros cortex	UBERON:0010533	77.45	gold quality
sural nerve	UBERON:0015488	77.36	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.34	gold quality
adrenal tissue	UBERON:0018303	76.69	gold quality
right lobe of liver	UBERON:0001114	76.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.