LINC02621

Summary

LINC02621 (long intergenic non-protein coding RNA 2621, HGNC:54098) is a long non-coding RNA gene on chromosome 10q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54098
Approved symbol	LINC02621
Name	long intergenic non-protein coding RNA 2621
Location	10q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234756
Ensembl biotype	lncRNA
Entrez	105378325
RNAcentral	URS00026A26D0 — lncRNA, 825 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000442753

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000442753 — 3 exons

Exon	Start	End
ENSE00001705493	62303500	62304033
ENSE00001715248	62302326	62302370
ENSE00001752289	62289521	62289647

Expression profiles

Bgee: expression breadth broad, 63 present calls, max score 77.19.

Top tissues by expression

63 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
lower esophagus mucosa	UBERON:0035834	77.19	gold quality
ectocervix	UBERON:0012249	68.57	gold quality
esophagus mucosa	UBERON:0002469	66.81	gold quality
esophagus	UBERON:0001043	66.12	gold quality
monocyte	CL:0000576	61.79	gold quality
tonsil	UBERON:0002372	60.03	gold quality
left ovary	UBERON:0002119	58.28	gold quality
urinary bladder	UBERON:0001255	58.14	gold quality
minor salivary gland	UBERON:0001830	58.11	gold quality
lymph node	UBERON:0000029	56.78	gold quality
vagina	UBERON:0000996	55.75	gold quality
blood	UBERON:0000178	54.20	gold quality
duodenum	UBERON:0002114	52.08	gold quality
bone marrow	UBERON:0002371	51.65	silver quality
cerebellum	UBERON:0002037	51.59	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.44	gold quality
islet of Langerhans	UBERON:0000006	50.38	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	50.22	gold quality
kidney	UBERON:0002113	50.07	gold quality
ovary	UBERON:0000992	49.32	gold quality
rectum	UBERON:0001052	48.36	gold quality
thoracic mammary gland	UBERON:0005200	48.22	gold quality
adult mammalian kidney	UBERON:0000082	46.63	gold quality
lower esophagus muscularis layer	UBERON:0035833	46.52	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.18	gold quality
body of pancreas	UBERON:0001150	45.99	gold quality
myometrium	UBERON:0001296	45.96	gold quality
prefrontal cortex	UBERON:0000451	45.82	silver quality
gastrocnemius	UBERON:0001388	45.78	silver quality
adipose tissue	UBERON:0001013	45.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.