LINC02624

Summary

LINC02624 (long intergenic non-protein coding RNA 2624, HGNC:54103) is a long non-coding RNA gene on chromosome 10q25.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54103
Approved symbol	LINC02624
Name	long intergenic non-protein coding RNA 2624
Location	10q25.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229775
Ensembl biotype	lncRNA
Entrez	105378470
RNAcentral	URS0000A76C37 — lncRNA, 562 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000424701, ENST00000426752, ENST00000449761, ENST00000452286, ENST00000665336

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424701 — 2 exons

Exon	Start	End
ENSE00001634373	106157631	106158145
ENSE00001778090	106140291	106140326

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 93.52.

Top tissues by expression

199 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	93.52	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.19	gold quality
ganglionic eminence	UBERON:0004023	66.44	gold quality
sperm	CL:0000019	63.91	silver quality
right testis	UBERON:0004534	62.41	gold quality
left testis	UBERON:0004533	61.95	gold quality
testis	UBERON:0000473	61.59	gold quality
sural nerve	UBERON:0015488	60.19	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	59.97	gold quality
right lobe of liver	UBERON:0001114	59.01	gold quality
liver	UBERON:0002107	58.50	gold quality
leukocyte	CL:0000738	56.83	gold quality
monocyte	CL:0000576	56.81	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.29	gold quality
lower lobe of lung	UBERON:0008949	53.67	silver quality
skin of hip	UBERON:0001554	53.60	silver quality
gastrocnemius	UBERON:0001388	51.86	gold quality
cerebellar vermis	UBERON:0004720	49.92	gold quality
adult mammalian kidney	UBERON:0000082	49.22	silver quality
right adrenal gland cortex	UBERON:0035827	47.47	gold quality
cortex of kidney	UBERON:0001225	47.35	gold quality
heart left ventricle	UBERON:0002084	46.79	gold quality
ovary	UBERON:0000992	46.69	silver quality
blood	UBERON:0000178	46.30	gold quality
cardiac ventricle	UBERON:0002082	45.90	gold quality
body of pancreas	UBERON:0001150	45.71	gold quality
prefrontal cortex	UBERON:0000451	45.69	gold quality
right atrium auricular region	UBERON:0006631	45.61	gold quality
tibial artery	UBERON:0007610	45.30	silver quality
upper lobe of lung	UBERON:0008948	45.07	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.89

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.