LINC02628

Summary

LINC02628 (long intergenic non-protein coding RNA 2628, HGNC:54107) is a long non-coding RNA gene on chromosome 10p11.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54107
Approved symbol	LINC02628
Name	long intergenic non-protein coding RNA 2628
Location	10p11.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226412
Ensembl biotype	lncRNA
Entrez	105376490
RNAcentral	URS00026A1DA3 — lncRNA, 646 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000457848

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457848 — 4 exons

Exon	Start	End
ENSE00001644723	33594120	33594211
ENSE00001654242	33599858	33600040
ENSE00001661247	33590622	33590769
ENSE00001668786	33578931	33579369

Expression profiles

Bgee: expression breadth broad, 14 present calls, max score 83.91.

Top tissues by expression

14 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.91	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.27	gold quality
prefrontal cortex	UBERON:0000451	56.20	gold quality
blood	UBERON:0000178	55.09	silver quality
gastrocnemius	UBERON:0001388	50.43	gold quality
monocyte	CL:0000576	50.05	silver quality
subcutaneous adipose tissue	UBERON:0002190	42.39	silver quality
esophagus mucosa	UBERON:0002469	41.07	silver quality
right atrium auricular region	UBERON:0006631	38.07	silver quality
lower esophagus muscularis layer	UBERON:0035833	37.64	silver quality
lung	UBERON:0002048	37.45	silver quality
testis	UBERON:0000473	32.40	silver quality
left testis	UBERON:0004533	31.51	silver quality
right testis	UBERON:0004534	30.18	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.