LINC02639

Summary

LINC02639 (long intergenic non-protein coding RNA 2639, HGNC:54122) is a long non-coding RNA gene on chromosome 10p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54122
Approved symbol	LINC02639
Name	long intergenic non-protein coding RNA 2639
Location	10p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230573
Ensembl biotype	lncRNA
Entrez	105376365
RNAcentral	URS0000A76FB0 — lncRNA, 555 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000413339, ENST00000735993

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413339 — 2 exons

Exon	Start	End
ENSE00001655282	3834481	3834728
ENSE00001787518	3833950	3834237

Expression profiles

Bgee: expression breadth broad, 45 present calls, max score 73.41.

Top tissues by expression

45 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	73.41	silver quality
blood	UBERON:0000178	53.81	gold quality
monocyte	CL:0000576	53.34	gold quality
prefrontal cortex	UBERON:0000451	52.96	gold quality
gastrocnemius	UBERON:0001388	52.22	gold quality
heart left ventricle	UBERON:0002084	47.82	gold quality
thyroid gland	UBERON:0002046	46.11	gold quality
tibial artery	UBERON:0007610	44.87	gold quality
heart	UBERON:0000948	44.84	gold quality
right atrium auricular region	UBERON:0006631	43.19	silver quality
body of stomach	UBERON:0001161	41.97	silver quality
subcutaneous adipose tissue	UBERON:0002190	41.91	silver quality
skin of leg	UBERON:0001511	41.74	silver quality
anterior cingulate cortex	UBERON:0009835	41.62	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	41.52	silver quality
muscle layer of sigmoid colon	UBERON:0035805	41.35	silver quality
omental fat pad	UBERON:0010414	41.12	gold quality
tibial nerve	UBERON:0001323	40.97	silver quality
right hemisphere of cerebellum	UBERON:0014890	40.78	silver quality
right lobe of thyroid gland	UBERON:0001119	40.51	silver quality
ascending aorta	UBERON:0001496	40.36	silver quality
skin of abdomen	UBERON:0001416	40.12	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	39.55	gold quality
adult mammalian kidney	UBERON:0000082	39.33	silver quality
small intestine	UBERON:0002108	39.28	gold quality
frontal cortex	UBERON:0001870	39.25	gold quality
hypothalamus	UBERON:0001898	39.21	silver quality
esophagus mucosa	UBERON:0002469	39.01	silver quality
transverse colon	UBERON:0001157	38.71	silver quality
lung	UBERON:0002048	38.41	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.