LINC02650

Summary

LINC02650 (long intergenic non-protein coding RNA 2650, HGNC:54135) is a long non-coding RNA gene on chromosome 10q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54135
Approved symbol	LINC02650
Name	long intergenic non-protein coding RNA 2650
Location	10q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233945
Ensembl biotype	lncRNA
Entrez	105378397
RNAcentral	URS0000A77280 — lncRNA, 524 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000441776, ENST00000791248

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441776 — 5 exons

Exon	Start	End
ENSE00001668556	83673139	83673239
ENSE00001756084	83675350	83675445
ENSE00003882307	83676582	83676674
ENSE00004172222	83672394	83672565
ENSE00004172224	83677030	83677154

Expression profiles

Bgee: expression breadth broad, 31 present calls, max score 57.68.

Top tissues by expression

31 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
myometrium	UBERON:0001296	57.68	gold quality
monocyte	CL:0000576	57.63	gold quality
blood	UBERON:0000178	56.60	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	48.42	gold quality
left testis	UBERON:0004533	47.47	gold quality
testis	UBERON:0000473	47.14	gold quality
tibial artery	UBERON:0007610	46.71	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.53	gold quality
popliteal artery	UBERON:0002250	46.50	gold quality
adrenal tissue	UBERON:0018303	46.34	silver quality
prefrontal cortex	UBERON:0000451	46.06	gold quality
right testis	UBERON:0004534	46.02	gold quality
left coronary artery	UBERON:0001626	45.82	gold quality
ascending aorta	UBERON:0001496	42.55	gold quality
thoracic aorta	UBERON:0001515	42.19	silver quality
right atrium auricular region	UBERON:0006631	41.45	silver quality
esophagus mucosa	UBERON:0002469	41.24	silver quality
tibial nerve	UBERON:0001323	41.21	gold quality
omental fat pad	UBERON:0010414	40.98	silver quality
endometrium	UBERON:0001295	40.87	silver quality
skin of leg	UBERON:0001511	40.29	silver quality
pituitary gland	UBERON:0000007	40.26	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	40.06	silver quality
Brodmann (1909) area 9	UBERON:0013540	39.69	silver quality
lower esophagus muscularis layer	UBERON:0035833	39.00	silver quality
skin of abdomen	UBERON:0001416	38.38	silver quality
left lobe of thyroid gland	UBERON:0001120	37.95	silver quality
right frontal lobe	UBERON:0002810	37.56	silver quality
muscle layer of sigmoid colon	UBERON:0035805	37.44	silver quality
anterior cingulate cortex	UBERON:0009835	36.39	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.