LINC02652

Summary

LINC02652 (long intergenic non-protein coding RNA 2652, HGNC:54137) is a long non-coding RNA gene on chromosome 10p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54137
Approved symbol	LINC02652
Name	long intergenic non-protein coding RNA 2652
Location	10p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237128
Ensembl biotype	lncRNA
Entrez	105376468
RNAcentral	URS0000A7672A — lncRNA, 289 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000421132, ENST00000841791, ENST00000841792

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421132 — 3 exons

Exon	Start	End
ENSE00001594754	28433008	28433107
ENSE00001736959	28495721	28495813
ENSE00001768861	28436142	28436221

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 89.16.

Top tissues by expression

85 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.16	gold quality
sural nerve	UBERON:0015488	80.63	gold quality
bone marrow	UBERON:0002371	67.20	gold quality
lymph node	UBERON:0000029	67.07	gold quality
islet of Langerhans	UBERON:0000006	65.33	gold quality
calcaneal tendon	UBERON:0003701	64.34	gold quality
placenta	UBERON:0001987	63.36	gold quality
monocyte	CL:0000576	62.51	gold quality
left coronary artery	UBERON:0001626	61.26	gold quality
muscle of leg	UBERON:0001383	60.74	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.40	gold quality
blood	UBERON:0000178	59.99	gold quality
prefrontal cortex	UBERON:0000451	58.99	gold quality
gastrocnemius	UBERON:0001388	58.94	gold quality
heart left ventricle	UBERON:0002084	58.50	gold quality
tonsil	UBERON:0002372	58.10	gold quality
urinary bladder	UBERON:0001255	57.09	gold quality
tibial artery	UBERON:0007610	56.51	gold quality
body of pancreas	UBERON:0001150	56.04	gold quality
endometrium	UBERON:0001295	55.26	gold quality
adult mammalian kidney	UBERON:0000082	54.60	gold quality
right uterine tube	UBERON:0001302	53.24	gold quality
kidney	UBERON:0002113	53.20	gold quality
body of stomach	UBERON:0001161	52.88	gold quality
stomach	UBERON:0000945	52.77	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	52.51	gold quality
lower esophagus muscularis layer	UBERON:0035833	52.40	gold quality
subcutaneous adipose tissue	UBERON:0002190	52.35	gold quality
ascending aorta	UBERON:0001496	52.09	gold quality
esophagus mucosa	UBERON:0002469	51.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.