LINC02656

Summary

LINC02656 (long intergenic non-protein coding RNA 2656, HGNC:54142) is a long non-coding RNA gene on chromosome 10p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54142
Approved symbol	LINC02656
Name	long intergenic non-protein coding RNA 2656
Location	10p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000212743
Ensembl biotype	lncRNA
Entrez	399716
RNAcentral	URS0000BC440D — lncRNA, 3493 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000391437

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000391437 — 1 exons

Exon	Start	End
ENSE00001509219	6350316	6352762

Expression profiles

Bgee: expression breadth ubiquitous, 158 present calls, max score 77.89.

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.89	gold quality
colonic epithelium	UBERON:0000397	71.72	gold quality
right uterine tube	UBERON:0001302	69.25	gold quality
blood	UBERON:0000178	67.92	gold quality
bone marrow cell	CL:0002092	67.78	silver quality
descending thoracic aorta	UBERON:0002345	64.18	gold quality
ascending aorta	UBERON:0001496	64.05	gold quality
thoracic aorta	UBERON:0001515	63.87	gold quality
sural nerve	UBERON:0015488	63.49	silver quality
right lung	UBERON:0002167	63.42	gold quality
metanephros cortex	UBERON:0010533	63.28	gold quality
mucosa of stomach	UBERON:0001199	62.06	gold quality
oviduct epithelium	UBERON:0004804	61.62	gold quality
spleen	UBERON:0002106	60.15	gold quality
cortical plate	UBERON:0005343	59.38	silver quality
right coronary artery	UBERON:0001625	59.10	gold quality
corpus callosum	UBERON:0002336	58.99	gold quality
ganglionic eminence	UBERON:0004023	58.82	gold quality
lower esophagus mucosa	UBERON:0035834	58.56	gold quality
ventricular zone	UBERON:0003053	58.36	silver quality
hindlimb stylopod muscle	UBERON:0004252	58.24	gold quality
aorta	UBERON:0000947	58.22	gold quality
left ovary	UBERON:0002119	57.14	gold quality
upper lobe of left lung	UBERON:0008952	57.06	gold quality
omental fat pad	UBERON:0010414	56.92	gold quality
peritoneum	UBERON:0002358	56.91	gold quality
left uterine tube	UBERON:0001303	56.85	gold quality
fallopian tube	UBERON:0003889	56.82	gold quality
upper lobe of lung	UBERON:0008948	56.82	gold quality
metanephros	UBERON:0000081	56.49	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.60

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.