LINC02668

Summary

LINC02668 (long intergenic non-protein coding RNA 2668, HGNC:54154) is a long non-coding RNA gene on chromosome 10p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54154
Approved symbol	LINC02668
Name	long intergenic non-protein coding RNA 2668
Location	10p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226762
Ensembl biotype	lncRNA
Entrez	105376354
RNAcentral	URS00026A20E1 — lncRNA, 886 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000417149, ENST00000655354, ENST00000662361, ENST00000665182, ENST00000669318, ENST00000724808, ENST00000724809, ENST00000724810, ENST00000724811, ENST00000724812, ENST00000724813

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417149 — 7 exons

Exon	Start	End
ENSE00001613904	3240127	3240502
ENSE00001655629	3244567	3244659
ENSE00001734594	3257144	3257932
ENSE00001805742	3256460	3256557
ENSE00003831431	3232388	3232582
ENSE00003833115	3239439	3239897
ENSE00003839569	3238261	3238611

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 77.30.

Top tissues by expression

88 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.30	gold quality
placenta	UBERON:0001987	71.11	gold quality
prefrontal cortex	UBERON:0000451	69.76	gold quality
superior frontal gyrus	UBERON:0002661	68.65	gold quality
frontal cortex	UBERON:0001870	67.62	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.11	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	66.06	gold quality
anterior cingulate cortex	UBERON:0009835	65.42	gold quality
right hemisphere of cerebellum	UBERON:0014890	64.94	gold quality
cerebral cortex	UBERON:0000956	64.79	gold quality
right frontal lobe	UBERON:0002810	64.21	gold quality
cerebellar hemisphere	UBERON:0002245	64.01	gold quality
brain	UBERON:0000955	60.38	gold quality
ganglionic eminence	UBERON:0004023	58.17	silver quality
primary visual cortex	UBERON:0002436	55.42	gold quality
caudate nucleus	UBERON:0001873	55.23	gold quality
urinary bladder	UBERON:0001255	51.80	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.66	gold quality
duodenum	UBERON:0002114	51.32	gold quality
pancreas	UBERON:0001264	49.33	silver quality
temporal lobe	UBERON:0001871	49.19	gold quality
monocyte	CL:0000576	49.01	silver quality
amygdala	UBERON:0001876	48.93	gold quality
lymph node	UBERON:0000029	48.90	silver quality
multicellular organism	UBERON:0000468	48.11	gold quality
gastrocnemius	UBERON:0001388	48.07	silver quality
gall bladder	UBERON:0002110	48.06	silver quality
blood	UBERON:0000178	47.48	silver quality
hypothalamus	UBERON:0001898	47.14	gold quality
islet of Langerhans	UBERON:0000006	47.02	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.