LINC02671

Summary

LINC02671 (long intergenic non-protein coding RNA 2671, HGNC:54158) is a long non-coding RNA gene on chromosome 10q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54158
Approved symbol	LINC02671
Name	long intergenic non-protein coding RNA 2671
Location	10q21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224714
Ensembl biotype	lncRNA
Entrez	101928887
RNAcentral	URS0000A76DE5 — lncRNA, 2602 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000425902, ENST00000655566

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425902 — 2 exons

Exon	Start	End
ENSE00001645294	64901136	64903425
ENSE00001738682	64924237	64924518

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 76.68.

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.68	gold quality
ganglionic eminence	UBERON:0004023	62.21	gold quality
ventricular zone	UBERON:0003053	61.65	gold quality
skeletal muscle tissue	UBERON:0001134	61.51	gold quality
cortical plate	UBERON:0005343	61.47	gold quality
myometrium	UBERON:0001296	57.88	gold quality
liver	UBERON:0002107	55.40	gold quality
monocyte	CL:0000576	55.36	gold quality
urinary bladder	UBERON:0001255	53.73	gold quality
muscle of leg	UBERON:0001383	53.24	silver quality
lymph node	UBERON:0000029	51.28	silver quality
blood	UBERON:0000178	51.01	silver quality
right lobe of liver	UBERON:0001114	49.89	silver quality
cortex of kidney	UBERON:0001225	49.11	gold quality
kidney	UBERON:0002113	48.93	gold quality
prefrontal cortex	UBERON:0000451	48.73	silver quality
islet of Langerhans	UBERON:0000006	48.59	silver quality
heart	UBERON:0000948	47.82	gold quality
adult mammalian kidney	UBERON:0000082	47.75	gold quality
gastrocnemius	UBERON:0001388	47.17	silver quality
lung	UBERON:0002048	47.00	gold quality
testis	UBERON:0000473	45.27	gold quality
gall bladder	UBERON:0002110	45.22	silver quality
right lobe of thyroid gland	UBERON:0001119	45.20	silver quality
frontal cortex	UBERON:0001870	45.17	silver quality
spleen	UBERON:0002106	44.71	gold quality
putamen	UBERON:0001874	44.02	silver quality
zone of skin	UBERON:0000014	43.94	gold quality
tibial artery	UBERON:0007610	43.90	silver quality
hypothalamus	UBERON:0001898	43.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.