LINC02679

Summary

LINC02679 (long intergenic non-protein coding RNA 2679, HGNC:54173) is a long non-coding RNA gene on chromosome 10q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54173
Approved symbol	LINC02679
Name	long intergenic non-protein coding RNA 2679
Location	10q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226676
Ensembl biotype	lncRNA
Entrez	105378385
RNAcentral	URS0000A76DDB — lncRNA, 659 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000421256, ENST00000429070

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421256 — 2 exons

Exon	Start	End
ENSE00001658319	79630755	79630934
ENSE00001659160	79631982	79632186

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 85.76.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.76	gold quality
colonic epithelium	UBERON:0000397	75.38	gold quality
ventricular zone	UBERON:0003053	74.47	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.56	gold quality
sural nerve	UBERON:0015488	72.40	gold quality
ganglionic eminence	UBERON:0004023	69.61	gold quality
bone marrow cell	CL:0002092	67.79	silver quality
skeletal muscle tissue	UBERON:0001134	64.83	gold quality
bone marrow	UBERON:0002371	63.96	gold quality
monocyte	CL:0000576	62.67	gold quality
leukocyte	CL:0000738	62.62	gold quality
tonsil	UBERON:0002372	62.55	gold quality
prefrontal cortex	UBERON:0000451	61.74	gold quality
stromal cell of endometrium	CL:0002255	60.55	gold quality
calcaneal tendon	UBERON:0003701	59.83	gold quality
corpus callosum	UBERON:0002336	59.45	gold quality
gall bladder	UBERON:0002110	59.16	gold quality
blood	UBERON:0000178	59.06	gold quality
placenta	UBERON:0001987	58.88	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.50	gold quality
superior frontal gyrus	UBERON:0002661	58.22	gold quality
granulocyte	CL:0000094	57.84	gold quality
primary visual cortex	UBERON:0002436	57.52	gold quality
adrenal tissue	UBERON:0018303	57.28	gold quality
islet of Langerhans	UBERON:0000006	56.94	gold quality
lymph node	UBERON:0000029	55.99	gold quality
muscle of leg	UBERON:0001383	54.55	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.27	gold quality
gastrocnemius	UBERON:0001388	53.99	gold quality
myometrium	UBERON:0001296	53.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.