LINC02680

Summary

LINC02680 (long intergenic non-protein coding RNA 2680, HGNC:54174) is a long non-coding RNA gene on chromosome 10p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54174
Approved symbol	LINC02680
Name	long intergenic non-protein coding RNA 2680
Location	10p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000285737
Ensembl biotype	lncRNA
Entrez	105376463
RNAcentral	URS0000DB9A14 — lncRNA, 3626 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000649291, ENST00000849446

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000649291 — 4 exons

Exon	Start	End
ENSE00003835200	27578371	27578713
ENSE00003837158	27593961	27594588
ENSE00003837751	27569787	27569933
ENSE00003838120	27564430	27566937

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 76.20.

Top tissues by expression

88 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.20	gold quality
sural nerve	UBERON:0015488	72.41	silver quality
blood	UBERON:0000178	55.70	silver quality
right hemisphere of cerebellum	UBERON:0014890	53.67	gold quality
liver	UBERON:0002107	51.34	silver quality
gall bladder	UBERON:0002110	50.57	gold quality
cortex of kidney	UBERON:0001225	50.12	silver quality
cerebellar cortex	UBERON:0002129	49.24	silver quality
adrenal tissue	UBERON:0018303	48.88	silver quality
cerebellar hemisphere	UBERON:0002245	48.84	silver quality
superior frontal gyrus	UBERON:0002661	48.73	silver quality
monocyte	CL:0000576	48.72	silver quality
calcaneal tendon	UBERON:0003701	48.44	silver quality
prefrontal cortex	UBERON:0000451	48.20	silver quality
vermiform appendix	UBERON:0001154	47.99	gold quality
placenta	UBERON:0001987	46.73	silver quality
primary visual cortex	UBERON:0002436	46.71	silver quality
islet of Langerhans	UBERON:0000006	46.56	silver quality
fundus of stomach	UBERON:0001160	46.54	gold quality
hindlimb stylopod muscle	UBERON:0004252	46.09	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.95	silver quality
muscle of leg	UBERON:0001383	45.11	silver quality
multicellular organism	UBERON:0000468	44.95	silver quality
gastrocnemius	UBERON:0001388	44.61	silver quality
myometrium	UBERON:0001296	44.43	silver quality
body of pancreas	UBERON:0001150	44.35	silver quality
caudate nucleus	UBERON:0001873	43.74	silver quality
left lobe of thyroid gland	UBERON:0001120	43.28	gold quality
right atrium auricular region	UBERON:0006631	43.06	silver quality
heart	UBERON:0000948	43.04	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.54

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.