LINC02684

Summary

LINC02684 (long intergenic non-protein coding RNA 2684, HGNC:54180) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54180
Approved symbol	LINC02684
Name	long intergenic non-protein coding RNA 2684
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255512
Ensembl biotype	lncRNA
Entrez	105369589
RNAcentral	URS00026A264A — lncRNA, 2145 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000532071, ENST00000657926

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000532071 — 3 exons

Exon	Start	End
ENSE00002166748	135075611	135075899
ENSE00002186612	135061781	135061947
ENSE00002194129	135074114	135074371

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 53.40.

Top tissues by expression

53 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endometrium	UBERON:0001295	53.40	gold quality
monocyte	CL:0000576	53.30	silver quality
adult mammalian kidney	UBERON:0000082	52.26	gold quality
blood	UBERON:0000178	51.58	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.38	silver quality
liver	UBERON:0002107	49.35	silver quality
islet of Langerhans	UBERON:0000006	48.70	gold quality
upper lobe of left lung	UBERON:0008952	48.07	gold quality
muscle of leg	UBERON:0001383	46.24	silver quality
tonsil	UBERON:0002372	45.64	gold quality
right lobe of liver	UBERON:0001114	45.61	silver quality
gastrocnemius	UBERON:0001388	44.89	silver quality
body of pancreas	UBERON:0001150	43.71	silver quality
heart left ventricle	UBERON:0002084	43.71	gold quality
left testis	UBERON:0004533	43.01	gold quality
heart	UBERON:0000948	43.00	silver quality
testis	UBERON:0000473	42.91	gold quality
mucosa of transverse colon	UBERON:0004991	42.87	silver quality
skin of leg	UBERON:0001511	42.86	silver quality
left lobe of thyroid gland	UBERON:0001120	42.68	silver quality
small intestine	UBERON:0002108	42.26	gold quality
prostate gland	UBERON:0002367	42.18	silver quality
ascending aorta	UBERON:0001496	41.62	silver quality
thyroid gland	UBERON:0002046	41.62	silver quality
esophagus	UBERON:0001043	41.58	gold quality
lower esophagus muscularis layer	UBERON:0035833	41.51	silver quality
thoracic aorta	UBERON:0001515	41.47	silver quality
right testis	UBERON:0004534	41.18	gold quality
subcutaneous adipose tissue	UBERON:0002190	41.15	gold quality
tibial artery	UBERON:0007610	41.04	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.