LINC02685

Summary

LINC02685 (long intergenic non-protein coding RNA 2685, HGNC:27350) is a long non-coding RNA gene on chromosome 11p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27350
Approved symbol	LINC02685
Name	long intergenic non-protein coding RNA 2685
Location	11p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254654
Ensembl biotype	lncRNA
Entrez	221122
RNAcentral	URS000075A793 — lncRNA, 1271 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000525114, ENST00000654603, ENST00000656313, ENST00000670250, ENST00000670262, ENST00000753501, ENST00000753502

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525114 — 4 exons

Exon	Start	End
ENSE00002143580	44977309	44977402
ENSE00002162232	44977488	44978028
ENSE00002179063	44974796	44974893
ENSE00003885269	44973770	44974407

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 80.46.

Top tissues by expression

161 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	80.46	gold quality
gingival epithelium	UBERON:0001949	73.37	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.73	gold quality
oocyte	CL:0000023	69.72	gold quality
mucosa of paranasal sinus	UBERON:0005030	69.40	gold quality
germinal epithelium of ovary	UBERON:0001304	68.42	gold quality
secondary oocyte	CL:0000655	67.93	gold quality
gingiva	UBERON:0001828	64.56	gold quality
superficial temporal artery	UBERON:0001614	63.86	gold quality
parotid gland	UBERON:0001831	63.39	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.19	gold quality
tendon of biceps brachii	UBERON:0008188	61.98	gold quality
vena cava	UBERON:0004087	61.63	gold quality
tendon	UBERON:0000043	61.15	gold quality
heart right ventricle	UBERON:0002080	61.01	gold quality
endothelial cell	CL:0000115	60.53	gold quality
buccal mucosa cell	CL:0002336	59.66	gold quality
esophagus squamous epithelium	UBERON:0006920	58.10	gold quality
saliva-secreting gland	UBERON:0001044	57.83	gold quality
Brodmann (1909) area 23	UBERON:0013554	57.36	gold quality
tonsil	UBERON:0002372	57.33	gold quality
epithelium of nasopharynx	UBERON:0001951	56.78	gold quality
vastus lateralis	UBERON:0001379	56.50	gold quality
quadriceps femoris	UBERON:0001377	56.44	gold quality
mouth mucosa	UBERON:0003729	56.37	gold quality
primary visual cortex	UBERON:0002436	55.86	gold quality
pons	UBERON:0000988	55.56	gold quality
upper leg skin	UBERON:0004262	55.41	silver quality
mammary duct	UBERON:0001765	55.35	gold quality
cerebellar hemisphere	UBERON:0002245	55.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.