LINC02686

Summary

LINC02686 (long intergenic non-protein coding RNA 2686, HGNC:54186) is a long non-coding RNA gene on chromosome 11p14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54186
Approved symbol	LINC02686
Name	long intergenic non-protein coding RNA 2686
Location	11p14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254594
Ensembl biotype	lncRNA
Entrez	105376594
RNAcentral	URS00026A27F8 — lncRNA, 1749 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000527283, ENST00000534492

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000527283 — 6 exons

Exon	Start	End
ENSE00002160452	24259436	24259562
ENSE00002163319	24262081	24262205
ENSE00002173110	24258192	24258311
ENSE00002186521	24248873	24248929
ENSE00002195532	24235477	24235505
ENSE00002196192	24259918	24260013

Expression profiles

Bgee: expression breadth broad, 20 present calls, max score 92.61.

Top tissues by expression

20 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.61	gold quality
blood	UBERON:0000178	58.37	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.61	gold quality
islet of Langerhans	UBERON:0000006	56.86	gold quality
monocyte	CL:0000576	54.63	gold quality
smooth muscle tissue	UBERON:0001135	50.92	gold quality
body of pancreas	UBERON:0001150	46.99	gold quality
right frontal lobe	UBERON:0002810	46.31	gold quality
adipose tissue	UBERON:0001013	46.23	gold quality
ascending aorta	UBERON:0001496	44.60	gold quality
testis	UBERON:0000473	43.73	gold quality
adrenal tissue	UBERON:0018303	43.21	silver quality
tibial nerve	UBERON:0001323	43.12	gold quality
left testis	UBERON:0004533	43.03	gold quality
left lobe of thyroid gland	UBERON:0001120	41.79	silver quality
right testis	UBERON:0004534	41.31	gold quality
substantia nigra	UBERON:0002038	40.51	silver quality
gastrocnemius	UBERON:0001388	38.53	silver quality
subcutaneous adipose tissue	UBERON:0002190	33.30	silver quality
caudate nucleus	UBERON:0001873	29.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.