LINC02687

Summary

LINC02687 (long intergenic non-protein coding RNA 2687, HGNC:54187) is a long non-coding RNA gene on chromosome 11p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54187
Approved symbol	LINC02687
Name	long intergenic non-protein coding RNA 2687
Location	11p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255267
Ensembl biotype	lncRNA
Entrez	399886
RNAcentral	URS00004CCD79 — lncRNA, 2597 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 27 — 27 lncRNA

ENST00000524410, ENST00000524488, ENST00000524565, ENST00000528390, ENST00000534604, ENST00000656602, ENST00000660758, ENST00000664257, ENST00000667593, ENST00000668755, ENST00000669834, ENST00000670220, ENST00000687184, ENST00000715749, ENST00000715750, ENST00000715751, ENST00000781084, ENST00000781085, ENST00000781086, ENST00000781087, ENST00000781088, ENST00000781089, ENST00000781090, ENST00000781091, ENST00000781092, ENST00000781093, ENST00000781094

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000524410 — 2 exons

Exon	Start	End
ENSE00002169942	45355371	45355602
ENSE00002197852	45365749	45366121

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 85.83.

FANTOM5 (CAGE): breadth broad, TPM avg 1.5574 / max 42.2922, expressed in 548 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
114021	1.5574	548

Top tissues by expression

41 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
liver	UBERON:0002107	85.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	76.02	silver quality
tonsil	UBERON:0002372	67.91	gold quality
cortical plate	UBERON:0005343	56.25	silver quality
blood	UBERON:0000178	53.41	gold quality
prefrontal cortex	UBERON:0000451	50.12	silver quality
small intestine	UBERON:0002108	48.81	gold quality
islet of Langerhans	UBERON:0000006	48.09	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.05	gold quality
esophagus	UBERON:0001043	46.57	gold quality
esophagus mucosa	UBERON:0002469	46.46	gold quality
tibial artery	UBERON:0007610	45.02	silver quality
cerebellar hemisphere	UBERON:0002245	44.92	gold quality
frontal cortex	UBERON:0001870	44.72	silver quality
superior frontal gyrus	UBERON:0002661	44.26	silver quality
skin of abdomen	UBERON:0001416	44.23	gold quality
nucleus accumbens	UBERON:0001882	44.00	silver quality
right hemisphere of cerebellum	UBERON:0014890	43.95	gold quality
putamen	UBERON:0001874	43.20	silver quality
caudate nucleus	UBERON:0001873	43.10	silver quality
zone of skin	UBERON:0000014	43.04	gold quality
cerebral cortex	UBERON:0000956	42.85	silver quality
brain	UBERON:0000955	42.79	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.75	silver quality
vagina	UBERON:0000996	42.74	gold quality
amygdala	UBERON:0001876	42.58	gold quality
hypothalamus	UBERON:0001898	42.25	gold quality
anterior cingulate cortex	UBERON:0009835	42.06	silver quality
skin of leg	UBERON:0001511	41.99	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	41.79	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.