LINC02698

Summary

LINC02698 (long intergenic non-protein coding RNA 2698, HGNC:54212) is a long non-coding RNA gene on chromosome 11q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54212
Approved symbol	LINC02698
Name	long intergenic non-protein coding RNA 2698
Location	11q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000256717
Ensembl biotype	lncRNA
Entrez	105369512
RNAcentral	URS0002A5D00E — lncRNA, 1092 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000539305

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000539305 — 3 exons

Exon	Start	End
ENSE00002294757	115676686	115676781
ENSE00002299694	115842736	115843146
ENSE00004245291	115659140	115659724

Expression profiles

Bgee: expression breadth broad, 66 present calls, max score 63.16.

Top tissues by expression

66 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	63.16	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.89	gold quality
monocyte	CL:0000576	55.03	gold quality
islet of Langerhans	UBERON:0000006	54.12	gold quality
prefrontal cortex	UBERON:0000451	54.07	gold quality
kidney	UBERON:0002113	49.82	gold quality
muscle of leg	UBERON:0001383	48.80	gold quality
heart left ventricle	UBERON:0002084	48.57	gold quality
gastrocnemius	UBERON:0001388	48.32	gold quality
heart	UBERON:0000948	47.98	gold quality
blood	UBERON:0000178	47.80	silver quality
tibial artery	UBERON:0007610	47.45	silver quality
right atrium auricular region	UBERON:0006631	46.86	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	46.56	gold quality
liver	UBERON:0002107	46.47	silver quality
nucleus accumbens	UBERON:0001882	46.41	gold quality
right lobe of liver	UBERON:0001114	46.22	gold quality
cerebellar cortex	UBERON:0002129	46.22	silver quality
cerebellar hemisphere	UBERON:0002245	46.04	silver quality
skin of abdomen	UBERON:0001416	45.73	gold quality
right hemisphere of cerebellum	UBERON:0014890	45.65	silver quality
substantia nigra	UBERON:0002038	44.85	gold quality
caudate nucleus	UBERON:0001873	44.59	gold quality
cortex of kidney	UBERON:0001225	44.19	gold quality
amygdala	UBERON:0001876	43.99	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	43.59	gold quality
putamen	UBERON:0001874	43.33	gold quality
Ammon’s horn	UBERON:0001954	43.06	gold quality
fallopian tube	UBERON:0003889	42.98	gold quality
adipose tissue	UBERON:0001013	42.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.