LINC02699

Summary

LINC02699 (long intergenic non-protein coding RNA 2699, HGNC:54213) is a long non-coding RNA gene on chromosome 11p14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54213
Approved symbol	LINC02699
Name	long intergenic non-protein coding RNA 2699
Location	11p14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254456
Ensembl biotype	lncRNA
Entrez	105376596
RNAcentral	URS00026A1E7F — lncRNA, 849 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000526327, ENST00000533049, ENST00000533942, ENST00000654912, ENST00000746470, ENST00000746471

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000526327 — 5 exons

Exon	Start	End
ENSE00002142997	25777694	25777791
ENSE00002147271	25740476	25740560
ENSE00002149572	25781629	25782017
ENSE00002190384	25780481	25780622
ENSE00003856509	25734757	25734869

Expression profiles

Bgee: expression breadth broad, 51 present calls, max score 86.13.

Top tissues by expression

51 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.13	gold quality
monocyte	CL:0000576	61.40	gold quality
left testis	UBERON:0004533	58.04	gold quality
testis	UBERON:0000473	57.99	gold quality
blood	UBERON:0000178	56.66	gold quality
right testis	UBERON:0004534	56.09	gold quality
prefrontal cortex	UBERON:0000451	54.87	gold quality
multicellular organism	UBERON:0000468	52.64	gold quality
tibial artery	UBERON:0007610	51.66	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.02	gold quality
lymph node	UBERON:0000029	50.07	gold quality
gastrocnemius	UBERON:0001388	49.87	gold quality
primary visual cortex	UBERON:0002436	47.18	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.79	gold quality
skin of abdomen	UBERON:0001416	45.59	gold quality
left coronary artery	UBERON:0001626	45.53	gold quality
lung	UBERON:0002048	44.57	gold quality
right lobe of liver	UBERON:0001114	44.32	silver quality
heart left ventricle	UBERON:0002084	43.33	silver quality
left ovary	UBERON:0002119	42.73	silver quality
thoracic mammary gland	UBERON:0005200	42.56	gold quality
body of uterus	UBERON:0009853	42.51	silver quality
right atrium auricular region	UBERON:0006631	42.47	silver quality
adenohypophysis	UBERON:0002196	41.99	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	41.59	gold quality
body of pancreas	UBERON:0001150	41.50	silver quality
nucleus accumbens	UBERON:0001882	41.45	silver quality
skin of leg	UBERON:0001511	41.35	silver quality
Ammon’s horn	UBERON:0001954	41.28	silver quality
pituitary gland	UBERON:0000007	40.55	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.