LINC02707

Summary

LINC02707 (long intergenic non-protein coding RNA 2707, HGNC:54224) is a long non-coding RNA gene on chromosome 11p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54224
Approved symbol	LINC02707
Name	long intergenic non-protein coding RNA 2707
Location	11p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255427
Ensembl biotype	lncRNA
Entrez	105376623
RNAcentral	URS00004FC1B8 — lncRNA, 564 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000527135

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000527135 — 2 exons

Exon	Start	End
ENSE00002160386	34573547	34573982
ENSE00002180754	34570876	34571003

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 54.27.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0247 / max 26.9104, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
113726	0.0247	3

Top tissues by expression

24 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortex of kidney	UBERON:0001225	54.27	gold quality
monocyte	CL:0000576	54.02	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.36	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.13	gold quality
saliva-secreting gland	UBERON:0001044	51.63	gold quality
prostate gland	UBERON:0002367	51.08	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.38	gold quality
corpus callosum	UBERON:0002336	50.22	gold quality
minor salivary gland	UBERON:0001830	49.53	gold quality
kidney	UBERON:0002113	48.68	gold quality
blood	UBERON:0000178	47.72	silver quality
caudate nucleus	UBERON:0001873	40.91	gold quality
esophagus mucosa	UBERON:0002469	40.91	silver quality
skin of leg	UBERON:0001511	40.20	gold quality
body of stomach	UBERON:0001161	39.27	silver quality
skin of abdomen	UBERON:0001416	38.55	silver quality
thoracic mammary gland	UBERON:0005200	38.13	silver quality
hypothalamus	UBERON:0001898	37.04	silver quality
upper lobe of left lung	UBERON:0008952	37.00	silver quality
subcutaneous adipose tissue	UBERON:0002190	36.04	silver quality
right frontal lobe	UBERON:0002810	35.87	silver quality
adult mammalian kidney	UBERON:0000082	35.44	silver quality
pituitary gland	UBERON:0000007	35.33	silver quality
nucleus accumbens	UBERON:0001882	34.08	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	10.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.