LINC02717

Summary

LINC02717 (long intergenic non-protein coding RNA 2717, HGNC:54234) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54234
Approved symbol	LINC02717
Name	long intergenic non-protein coding RNA 2717
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000285735
Ensembl biotype	lncRNA
Entrez	105369588
RNAcentral	URS0002A2694C — lncRNA, 2442 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000650337, ENST00000652919, ENST00000780343, ENST00000780344, ENST00000780345, ENST00000780346, ENST00000780347, ENST00000780348, ENST00000780349, ENST00000780350, ENST00000780351, ENST00000780352

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000650337 — 4 exons

Exon	Start	End
ENSE00003836332	135003721	135003862
ENSE00003838610	134995838	134997088
ENSE00004151555	134994959	134995504
ENSE00004151564	135007513	135008015

Expression profiles

Bgee: expression breadth broad, 77 present calls, max score 77.08.

Top tissues by expression

77 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.08	silver quality
superior frontal gyrus	UBERON:0002661	63.09	gold quality
ventricular zone	UBERON:0003053	61.84	gold quality
prefrontal cortex	UBERON:0000451	61.75	gold quality
cortical plate	UBERON:0005343	60.20	gold quality
frontal cortex	UBERON:0001870	59.96	gold quality
right hemisphere of cerebellum	UBERON:0014890	59.21	gold quality
right frontal lobe	UBERON:0002810	57.34	gold quality
primary visual cortex	UBERON:0002436	56.69	gold quality
cerebral cortex	UBERON:0000956	55.78	gold quality
ganglionic eminence	UBERON:0004023	55.73	silver quality
Brodmann (1909) area 9	UBERON:0013540	55.08	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	54.98	gold quality
islet of Langerhans	UBERON:0000006	54.91	gold quality
rectum	UBERON:0001052	54.85	gold quality
pituitary gland	UBERON:0000007	54.59	gold quality
cerebellar hemisphere	UBERON:0002245	54.40	gold quality
brain	UBERON:0000955	53.11	gold quality
anterior cingulate cortex	UBERON:0009835	52.74	gold quality
adenohypophysis	UBERON:0002196	52.25	gold quality
pancreas	UBERON:0001264	51.28	gold quality
blood	UBERON:0000178	51.25	silver quality
duodenum	UBERON:0002114	50.32	gold quality
vermiform appendix	UBERON:0001154	50.07	gold quality
monocyte	CL:0000576	49.54	silver quality
cortex of kidney	UBERON:0001225	48.81	gold quality
corpus callosum	UBERON:0002336	48.49	gold quality
left testis	UBERON:0004533	47.10	gold quality
testis	UBERON:0000473	46.99	gold quality
right lobe of liver	UBERON:0001114	46.87	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.