LINC02721

Summary

LINC02721 (long intergenic non-protein coding RNA 2721, HGNC:54238) is a long non-coding RNA gene on chromosome 11p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54238
Approved symbol	LINC02721
Name	long intergenic non-protein coding RNA 2721
Location	11p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255133
Ensembl biotype	lncRNA
Entrez	105376620
RNAcentral	URS00026A2569 — lncRNA, 1323 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000525320, ENST00000802892, ENST00000802893, ENST00000802894, ENST00000802895

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525320 — 3 exons

Exon	Start	End
ENSE00002176086	33821994	33822378
ENSE00002190124	33819790	33819904
ENSE00002196684	33813873	33814967

Expression profiles

Bgee: expression breadth broad, 75 present calls, max score 66.29.

Top tissues by expression

75 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
testis	UBERON:0000473	66.29	gold quality
left testis	UBERON:0004533	66.18	gold quality
right testis	UBERON:0004534	65.81	gold quality
cortical plate	UBERON:0005343	61.70	silver quality
ganglionic eminence	UBERON:0004023	59.27	gold quality
nucleus accumbens	UBERON:0001882	53.73	gold quality
monocyte	CL:0000576	53.68	silver quality
muscle of leg	UBERON:0001383	52.45	gold quality
gastrocnemius	UBERON:0001388	51.86	gold quality
islet of Langerhans	UBERON:0000006	51.78	gold quality
multicellular organism	UBERON:0000468	51.48	gold quality
skeletal muscle tissue	UBERON:0001134	51.41	silver quality
caudate nucleus	UBERON:0001873	51.28	gold quality
putamen	UBERON:0001874	51.07	gold quality
blood	UBERON:0000178	50.48	gold quality
cortex of kidney	UBERON:0001225	50.39	gold quality
tonsil	UBERON:0002372	50.04	gold quality
placenta	UBERON:0001987	49.32	gold quality
prefrontal cortex	UBERON:0000451	47.31	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.80	silver quality
duodenum	UBERON:0002114	46.36	silver quality
heart left ventricle	UBERON:0002084	44.55	silver quality
body of pancreas	UBERON:0001150	44.00	silver quality
lung	UBERON:0002048	43.63	silver quality
vermiform appendix	UBERON:0001154	43.19	silver quality
anterior cingulate cortex	UBERON:0009835	43.12	gold quality
descending thoracic aorta	UBERON:0002345	42.90	silver quality
muscle layer of sigmoid colon	UBERON:0035805	42.81	gold quality
hypothalamus	UBERON:0001898	42.80	gold quality
endometrium	UBERON:0001295	42.70	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.