LINC02723

Summary

LINC02723 (long intergenic non-protein coding RNA 2723, HGNC:54240) is a long non-coding RNA gene on chromosome 11q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54240
Approved symbol	LINC02723
Name	long intergenic non-protein coding RNA 2723
Location	11q13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231680
Ensembl biotype	lncRNA
Entrez	107984366
RNAcentral	URS0002A3C988 — lncRNA, 1629 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000457725, ENST00000701634, ENST00000757351

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457725 — 2 exons

Exon	Start	End
ENSE00001768583	64394342	64394699
ENSE00004108389	64395205	64396158

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 84.37.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1069 / max 19.7767, expressed in 47 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
120396	0.1069	47

Top tissues by expression

116 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	84.37	gold quality
leukocyte	CL:0000738	84.12	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.10	gold quality
granulocyte	CL:0000094	78.27	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.62	silver quality
blood	UBERON:0000178	69.35	gold quality
metanephros cortex	UBERON:0010533	68.77	gold quality
bone marrow cell	CL:0002092	65.38	silver quality
primary visual cortex	UBERON:0002436	65.25	gold quality
prefrontal cortex	UBERON:0000451	60.17	gold quality
bone marrow	UBERON:0002371	59.65	gold quality
ganglionic eminence	UBERON:0004023	58.66	gold quality
cortex of kidney	UBERON:0001225	57.84	gold quality
hypothalamus	UBERON:0001898	56.68	gold quality
frontal cortex	UBERON:0001870	55.48	gold quality
substantia nigra	UBERON:0002038	55.39	gold quality
skeletal muscle tissue	UBERON:0001134	54.95	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	53.81	gold quality
cerebral cortex	UBERON:0000956	52.86	gold quality
testis	UBERON:0000473	52.65	silver quality
kidney	UBERON:0002113	52.54	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	52.34	gold quality
vermiform appendix	UBERON:0001154	52.24	gold quality
urinary bladder	UBERON:0001255	52.03	gold quality
muscle tissue	UBERON:0002385	51.42	gold quality
lymph node	UBERON:0000029	51.39	gold quality
multicellular organism	UBERON:0000468	51.33	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.29	gold quality
tonsil	UBERON:0002372	51.09	gold quality
left uterine tube	UBERON:0001303	50.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.