LINC02732

Summary

LINC02732 (long intergenic non-protein coding RNA 2732, HGNC:54249) is a long non-coding RNA gene on chromosome 11q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54249
Approved symbol	LINC02732
Name	long intergenic non-protein coding RNA 2732
Location	11q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254416
Ensembl biotype	lncRNA
Entrez	105369486
RNAcentral	URS0000ABD8E2 — lncRNA, 1340 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000526605, ENST00000526703, ENST00000655432, ENST00000655839, ENST00000661010, ENST00000662858, ENST00000702818, ENST00000796187, ENST00000796188, ENST00000796189, ENST00000796190, ENST00000796191, ENST00000796192, ENST00000796193, ENST00000796404

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000526605 — 3 exons

Exon	Start	End
ENSE00002165787	110366361	110366534
ENSE00002201935	110355130	110355518
ENSE00003855799	110406244	110407613

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 93.47.

FANTOM5 (CAGE): breadth broad, TPM avg 0.8415 / max 95.3451, expressed in 212 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
116589	0.4479	172
116588	0.2001	95
116591	0.1261	49
116590	0.0673	26

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right adrenal gland cortex	UBERON:0035827	93.47	gold quality
right adrenal gland	UBERON:0001233	90.22	gold quality
left adrenal gland	UBERON:0001234	89.65	gold quality
left adrenal gland cortex	UBERON:0035825	89.29	gold quality
adrenal gland	UBERON:0002369	88.95	gold quality
adrenal tissue	UBERON:0018303	84.90	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.85	silver quality
islet of Langerhans	UBERON:0000006	70.93	gold quality
adult mammalian kidney	UBERON:0000082	66.08	gold quality
skeletal muscle tissue	UBERON:0001134	64.07	gold quality
kidney	UBERON:0002113	63.98	gold quality
ganglionic eminence	UBERON:0004023	61.93	gold quality
liver	UBERON:0002107	58.93	gold quality
superior frontal gyrus	UBERON:0002661	58.45	gold quality
pancreas	UBERON:0001264	58.42	gold quality
placenta	UBERON:0001987	58.13	gold quality
ventricular zone	UBERON:0003053	57.95	silver quality
cortex of kidney	UBERON:0001225	57.85	gold quality
tibial nerve	UBERON:0001323	57.81	gold quality
right lobe of liver	UBERON:0001114	55.83	gold quality
muscle tissue	UBERON:0002385	55.40	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.00	gold quality
right coronary artery	UBERON:0001625	52.97	gold quality
prefrontal cortex	UBERON:0000451	52.84	gold quality
spleen	UBERON:0002106	52.60	gold quality
lymph node	UBERON:0000029	52.52	gold quality
popliteal artery	UBERON:0002250	52.04	gold quality
primary visual cortex	UBERON:0002436	52.04	gold quality
tibial artery	UBERON:0007610	52.02	gold quality
blood	UBERON:0000178	51.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.