LINC02741

Summary

LINC02741 (long intergenic non-protein coding RNA 2741, HGNC:54258) is a long non-coding RNA gene on chromosome 11p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54258
Approved symbol	LINC02741
Name	long intergenic non-protein coding RNA 2741
Location	11p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255388
Ensembl biotype	lncRNA
Entrez	105376640
RNAcentral	URS0000EF67AA — lncRNA, 1539 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000526978, ENST00000531210, ENST00000655470, ENST00000657598, ENST00000665237, ENST00000816272, ENST00000816273

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000526978 — 7 exons

Exon	Start	End
ENSE00002144011	41528140	41528209
ENSE00002154936	41518895	41519164
ENSE00002170647	41620348	41620399
ENSE00002188605	41591106	41591196
ENSE00002191242	41714405	41714448
ENSE00002194274	41712349	41712453
ENSE00002196856	41589419	41589645

Expression profiles

Bgee: expression breadth broad, 58 present calls, max score 82.29.

Top tissues by expression

58 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.29	gold quality
colonic epithelium	UBERON:0000397	74.94	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.74	gold quality
cortical plate	UBERON:0005343	61.61	gold quality
cortex of kidney	UBERON:0001225	59.13	gold quality
skeletal muscle tissue	UBERON:0001134	56.79	gold quality
endometrium	UBERON:0001295	55.76	silver quality
monocyte	CL:0000576	55.49	gold quality
prefrontal cortex	UBERON:0000451	55.39	gold quality
blood	UBERON:0000178	52.79	silver quality
testis	UBERON:0000473	52.69	gold quality
left testis	UBERON:0004533	52.48	gold quality
heart left ventricle	UBERON:0002084	52.24	gold quality
right testis	UBERON:0004534	50.90	gold quality
primary visual cortex	UBERON:0002436	50.63	silver quality
Brodmann (1909) area 9	UBERON:0013540	49.48	gold quality
tibial artery	UBERON:0007610	49.29	silver quality
heart	UBERON:0000948	48.41	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	47.41	gold quality
right lobe of liver	UBERON:0001114	46.88	silver quality
muscle of leg	UBERON:0001383	46.83	gold quality
lung	UBERON:0002048	46.64	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	46.20	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.08	gold quality
placenta	UBERON:0001987	45.86	silver quality
ascending aorta	UBERON:0001496	45.58	gold quality
islet of Langerhans	UBERON:0000006	44.92	silver quality
gastrocnemius	UBERON:0001388	44.82	silver quality
right lobe of thyroid gland	UBERON:0001119	44.47	gold quality
hypothalamus	UBERON:0001898	44.44	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.