LINC02743

Summary

LINC02743 (long intergenic non-protein coding RNA 2743, HGNC:54261) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54261
Approved symbol	LINC02743
Name	long intergenic non-protein coding RNA 2743
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255258
Ensembl biotype	lncRNA
Entrez	646522
RNAcentral	URS000075D411 — lncRNA, 1032 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 61 — 61 lncRNA

ENST00000526254, ENST00000762255, ENST00000762256, ENST00000762257, ENST00000762258, ENST00000762259, ENST00000762260, ENST00000762261, ENST00000762262, ENST00000762263, ENST00000762264, ENST00000762265, ENST00000762266, ENST00000762267, ENST00000762268, ENST00000762269, ENST00000762270, ENST00000762271, ENST00000762272, ENST00000762273, ENST00000762274, ENST00000762275, ENST00000762276, ENST00000762277, ENST00000762278, ENST00000762279, ENST00000762280, ENST00000762281, ENST00000762282, ENST00000762283, ENST00000762284, ENST00000762285, ENST00000762286, ENST00000762287, ENST00000762288, ENST00000762289, ENST00000762290, ENST00000762291, ENST00000762292, ENST00000762293, ENST00000762294, ENST00000762295, ENST00000762296, ENST00000762297, ENST00000762298, ENST00000762299, ENST00000762300, ENST00000762301, ENST00000762302, ENST00000762303, ENST00000762304, ENST00000762305, ENST00000762306, ENST00000762307, ENST00000762308, ENST00000762309, ENST00000762310, ENST00000762311, ENST00000762312, ENST00000762313, ENST00000762314

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000526254 — 3 exons

Exon	Start	End
ENSE00002158173	133783671	133784524
ENSE00002163157	133810077	133810169
ENSE00002170532	133810349	133810376

Expression profiles

Bgee: expression breadth broad, 39 present calls, max score 77.31.

Top tissues by expression

170 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.31	silver quality
ganglionic eminence	UBERON:0004023	57.30	gold quality
spleen	UBERON:0002106	56.53	gold quality
buccal mucosa cell	CL:0002336	56.49	gold quality
prefrontal cortex	UBERON:0000451	49.75	gold quality
left testis	UBERON:0004533	48.25	gold quality
testis	UBERON:0000473	47.23	gold quality
right testis	UBERON:0004534	45.58	gold quality
islet of Langerhans	UBERON:0000006	44.77	silver quality
gastrocnemius	UBERON:0001388	44.40	gold quality
right hemisphere of cerebellum	UBERON:0014890	43.70	gold quality
cerebellar hemisphere	UBERON:0002245	43.57	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
amniotic fluid	UBERON:0000173	43.28	gold quality
corpus epididymis	UBERON:0004359	43.14	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
ascending aorta	UBERON:0001496	42.45	gold quality
frontal cortex	UBERON:0001870	42.39	silver quality
anterior cingulate cortex	UBERON:0009835	42.32	silver quality
neocortex	UBERON:0001950	42.23	silver quality
body of pancreas	UBERON:0001150	42.18	silver quality
anatomical system	UBERON:0000467	42.12	gold quality
blood	UBERON:0000178	42.10	gold quality
substantia nigra pars reticulata	UBERON:0001966	42.03	gold quality
multicellular organism	UBERON:0000468	42.01	gold quality
material anatomical entity	UBERON:0000465	42.00	gold quality
Brodmann (1909) area 9	UBERON:0013540	41.98	silver quality
tibial nerve	UBERON:0001323	41.66	gold quality
bone marrow	UBERON:0002371	41.54	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	41.49	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.