LINC02746

Summary

LINC02746 (long intergenic non-protein coding RNA 2746, HGNC:54264) is a long non-coding RNA gene on chromosome 11q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54264
Approved symbol	LINC02746
Name	long intergenic non-protein coding RNA 2746
Location	11q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000282916
Ensembl biotype	lncRNA
Entrez	105369431
RNAcentral	URS0000A76634 — lncRNA, 1764 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000635432

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000635432 — 3 exons

Exon	Start	End
ENSE00003785781	92915202	92915644
ENSE00003789890	92913227	92914475
ENSE00003791538	92915023	92915121

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 70.19.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0192 / max 19.3967, expressed in 4 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
121811	0.0192	4

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	70.19	gold quality
testis	UBERON:0000473	70.14	gold quality
right testis	UBERON:0004534	69.30	gold quality
colonic epithelium	UBERON:0000397	60.36	silver quality
hindlimb stylopod muscle	UBERON:0004252	58.27	gold quality
ventricular zone	UBERON:0003053	58.09	silver quality
cortical plate	UBERON:0005343	56.85	silver quality
skeletal muscle tissue	UBERON:0001134	55.78	silver quality
leukocyte	CL:0000738	54.10	silver quality
blood	UBERON:0000178	52.27	silver quality
endometrium	UBERON:0001295	52.20	silver quality
primary visual cortex	UBERON:0002436	52.12	gold quality
monocyte	CL:0000576	51.57	silver quality
bone marrow	UBERON:0002371	51.49	silver quality
stromal cell of endometrium	CL:0002255	51.25	silver quality
placenta	UBERON:0001987	50.21	gold quality
cortex of kidney	UBERON:0001225	49.92	silver quality
muscle of leg	UBERON:0001383	49.54	gold quality
gall bladder	UBERON:0002110	49.04	silver quality
liver	UBERON:0002107	48.94	silver quality
multicellular organism	UBERON:0000468	48.53	gold quality
lymph node	UBERON:0000029	48.47	silver quality
prefrontal cortex	UBERON:0000451	47.82	silver quality
adult mammalian kidney	UBERON:0000082	47.02	silver quality
heart left ventricle	UBERON:0002084	46.93	gold quality
gastrocnemius	UBERON:0001388	46.91	gold quality
calcaneal tendon	UBERON:0003701	46.78	silver quality
islet of Langerhans	UBERON:0000006	46.28	silver quality
superior frontal gyrus	UBERON:0002661	46.24	silver quality
right lobe of liver	UBERON:0001114	46.15	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.