LINC02750

Summary

LINC02750 (long intergenic non-protein coding RNA 2750, HGNC:54269) is a long non-coding RNA gene on chromosome 11p11.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54269
Approved symbol	LINC02750
Name	long intergenic non-protein coding RNA 2750
Location	11p11.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254518
Ensembl biotype	lncRNA
Entrez	105369150
RNAcentral	URS00026A275A — lncRNA, 3595 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000525654, ENST00000528459, ENST00000529219, ENST00000532103, ENST00000533230, ENST00000728504, ENST00000728505, ENST00000728506, ENST00000728507, ENST00000728508, ENST00000728509, ENST00000728737, ENST00000728738

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525654 — 2 exons

Exon	Start	End
ENSE00004055494	50301944	50302430
ENSE00004055496	50298565	50298917

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 80.35.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2031 / max 28.8694, expressed in 64 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
114244	0.1274	55
114245	0.0757	31

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.35	gold quality
right testis	UBERON:0004534	62.61	gold quality
testis	UBERON:0000473	61.03	gold quality
left testis	UBERON:0004533	60.55	gold quality
adrenal gland	UBERON:0002369	60.20	gold quality
placenta	UBERON:0001987	59.44	gold quality
left adrenal gland cortex	UBERON:0035825	57.54	gold quality
urinary bladder	UBERON:0001255	54.95	gold quality
blood	UBERON:0000178	53.01	silver quality
nucleus accumbens	UBERON:0001882	51.86	gold quality
multicellular organism	UBERON:0000468	51.59	gold quality
lymph node	UBERON:0000029	49.55	gold quality
pancreas	UBERON:0001264	49.52	gold quality
prefrontal cortex	UBERON:0000451	49.14	gold quality
superior frontal gyrus	UBERON:0002661	49.12	gold quality
vermiform appendix	UBERON:0001154	48.98	gold quality
liver	UBERON:0002107	48.90	gold quality
left coronary artery	UBERON:0001626	48.60	gold quality
body of pancreas	UBERON:0001150	48.09	gold quality
monocyte	CL:0000576	47.86	silver quality
heart	UBERON:0000948	47.49	gold quality
gastrocnemius	UBERON:0001388	47.46	gold quality
heart left ventricle	UBERON:0002084	47.08	gold quality
adult mammalian kidney	UBERON:0000082	46.81	gold quality
right atrium auricular region	UBERON:0006631	46.78	gold quality
tibial artery	UBERON:0007610	45.78	gold quality
thoracic mammary gland	UBERON:0005200	44.78	gold quality
frontal cortex	UBERON:0001870	44.55	silver quality
right lobe of liver	UBERON:0001114	44.41	silver quality
prostate gland	UBERON:0002367	44.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.