LINC02762

Summary

LINC02762 (long intergenic non-protein coding RNA 2762, HGNC:27443) is a long non-coding RNA gene on chromosome 11q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27443
Approved symbol	LINC02762
Name	long intergenic non-protein coding RNA 2762
Location	11q23.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	lnc-PTS-1
Ensembl gene	ENSG00000250303
Ensembl biotype	lncRNA
Entrez	283140
RNAcentral	URS00007D0844 — lncRNA, 2749 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 48 — 48 lncRNA

ENST00000419895, ENST00000504610, ENST00000527511, ENST00000529938, ENST00000532168, ENST00000666993, ENST00000685038, ENST00000689463, ENST00000690533, ENST00000691869, ENST00000693507, ENST00000701675, ENST00000701847, ENST00000729062, ENST00000729063, ENST00000729064, ENST00000729065, ENST00000729066, ENST00000729067, ENST00000729068, ENST00000729069, ENST00000729070, ENST00000729071, ENST00000729072, ENST00000729073, ENST00000729074, ENST00000729075, ENST00000729076, ENST00000729077, ENST00000729078, ENST00000729079, ENST00000729080, ENST00000729081, ENST00000729082, ENST00000729083, ENST00000729084, ENST00000729085, ENST00000729086, ENST00000729087, ENST00000729088, ENST00000729089, ENST00000729090, ENST00000729091, ENST00000729092, ENST00000729093, ENST00000729094, ENST00000729095, ENST00000729096

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419895 — 3 exons

Exon	Start	End
ENSE00001699910	112291320	112292779
ENSE00001960399	112290201	112290509
ENSE00003927744	112293727	112294119

Expression profiles

Bgee: expression breadth ubiquitous, 198 present calls, max score 95.04.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 4.4463 / max 78.0288, expressed in 1253 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
116720	4.1084	1168
116719	0.1434	99
116721	0.1398	74
116722	0.0546	16

Top tissues by expression

234 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
apex of heart	UBERON:0002098	95.04	gold quality
buccal mucosa cell	CL:0002336	93.37	gold quality
cortical plate	UBERON:0005343	92.35	gold quality
heart left ventricle	UBERON:0002084	92.27	gold quality
left ventricle myocardium	UBERON:0006566	92.22	gold quality
cardiac ventricle	UBERON:0002082	91.89	gold quality
right atrium auricular region	UBERON:0006631	89.71	gold quality
cardiac atrium	UBERON:0002081	89.20	gold quality
heart	UBERON:0000948	88.95	gold quality
myocardium	UBERON:0002349	88.35	silver quality
hindlimb stylopod muscle	UBERON:0004252	88.28	gold quality
tibialis anterior	UBERON:0001385	88.27	silver quality
cardiac muscle of right atrium	UBERON:0003379	87.41	silver quality
heart right ventricle	UBERON:0002080	87.34	gold quality
ascending aorta	UBERON:0001496	84.96	gold quality
thoracic aorta	UBERON:0001515	84.76	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	84.75	gold quality
skeletal muscle tissue	UBERON:0001134	84.47	gold quality
muscle of leg	UBERON:0001383	84.22	gold quality
muscle tissue	UBERON:0002385	84.00	gold quality
gastrocnemius	UBERON:0001388	83.45	gold quality
aorta	UBERON:0000947	83.01	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	82.97	silver quality
amygdala	UBERON:0001876	82.54	gold quality
descending thoracic aorta	UBERON:0002345	82.31	gold quality
biceps brachii	UBERON:0001507	82.14	gold quality
lower esophagus muscularis layer	UBERON:0035833	82.03	gold quality
lower esophagus	UBERON:0013473	81.99	gold quality
popliteal artery	UBERON:0002250	81.82	gold quality
tibial artery	UBERON:0007610	81.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.37

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.