LINC02768

Summary

LINC02768 (long intergenic non-protein coding RNA 2768, HGNC:54288) is a long non-coding RNA gene on chromosome 1q42.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54288
Approved symbol	LINC02768
Name	long intergenic non-protein coding RNA 2768
Location	1q42.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229291
Ensembl biotype	lncRNA
Entrez	105373212
RNAcentral	URS00026A1D31 — lncRNA, 2308 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000438371, ENST00000443207, ENST00000715678, ENST00000787060, ENST00000787061, ENST00000787062, ENST00000787063, ENST00000787064, ENST00000787065, ENST00000787066, ENST00000787067

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000438371 — 2 exons

Exon	Start	End
ENSE00001762454	235943567	235943805
ENSE00001806578	235942553	235943053

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 90.83.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2471 / max 80.8629, expressed in 55 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
18198	0.1766	53
202014	0.0705	14

Top tissues by expression

116 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.67	gold quality
corpus callosum	UBERON:0002336	86.67	gold quality
right lobe of liver	UBERON:0001114	80.35	gold quality
liver	UBERON:0002107	79.97	gold quality
calcaneal tendon	UBERON:0003701	79.16	gold quality
prefrontal cortex	UBERON:0000451	76.40	gold quality
leukocyte	CL:0000738	74.71	gold quality
right lung	UBERON:0002167	74.71	gold quality
monocyte	CL:0000576	74.69	gold quality
hindlimb stylopod muscle	UBERON:0004252	74.69	gold quality
superior frontal gyrus	UBERON:0002661	74.22	gold quality
smooth muscle tissue	UBERON:0001135	72.33	gold quality
left uterine tube	UBERON:0001303	71.94	gold quality
left ovary	UBERON:0002119	71.22	gold quality
descending thoracic aorta	UBERON:0002345	71.08	gold quality
popliteal artery	UBERON:0002250	70.86	gold quality
tibial artery	UBERON:0007610	70.86	gold quality
ovary	UBERON:0000992	70.55	gold quality
fundus of stomach	UBERON:0001160	70.20	gold quality
left coronary artery	UBERON:0001626	70.20	gold quality
ectocervix	UBERON:0012249	70.09	gold quality
thoracic aorta	UBERON:0001515	69.90	gold quality
ascending aorta	UBERON:0001496	69.75	gold quality
nucleus accumbens	UBERON:0001882	69.56	gold quality
lower esophagus mucosa	UBERON:0035834	69.54	gold quality
granulocyte	CL:0000094	69.13	gold quality
subcutaneous adipose tissue	UBERON:0002190	69.07	gold quality
adipose tissue	UBERON:0001013	68.96	gold quality
right ovary	UBERON:0002118	68.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.40

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.