LINC02771

Summary

LINC02771 (long intergenic non-protein coding RNA 2771, HGNC:54291) is a long non-coding RNA gene on chromosome 1q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54291
Approved symbol	LINC02771
Name	long intergenic non-protein coding RNA 2771
Location	1q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224535
Ensembl biotype	lncRNA
Entrez	105372907
RNAcentral	URS00026A1AF7 — lncRNA, 651 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000439570, ENST00000661486, ENST00000850335, ENST00000850336, ENST00000850337, ENST00000850338, ENST00000850339, ENST00000850340, ENST00000850341, ENST00000850342, ENST00000850343, ENST00000850344, ENST00000850345, ENST00000850346, ENST00000850347

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439570 — 3 exons

Exon	Start	End
ENSE00001769601	212467667	212467833
ENSE00004281680	212467926	212468023
ENSE00004281683	212466699	212467097

Expression profiles

Bgee: expression breadth broad, 82 present calls, max score 67.23.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0107 / max 11.7036, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
17378	0.0107	3

Top tissues by expression

82 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	67.23	gold quality
left testis	UBERON:0004533	62.13	gold quality
testis	UBERON:0000473	62.05	gold quality
prefrontal cortex	UBERON:0000451	55.29	gold quality
lymph node	UBERON:0000029	55.15	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	52.07	silver quality
blood	UBERON:0000178	51.42	gold quality
right coronary artery	UBERON:0001625	50.67	gold quality
vermiform appendix	UBERON:0001154	50.41	gold quality
body of pancreas	UBERON:0001150	50.30	gold quality
monocyte	CL:0000576	50.29	silver quality
lung	UBERON:0002048	49.78	silver quality
islet of Langerhans	UBERON:0000006	49.62	gold quality
endometrium	UBERON:0001295	48.95	gold quality
left adrenal gland	UBERON:0001234	47.91	gold quality
tibial artery	UBERON:0007610	47.53	gold quality
popliteal artery	UBERON:0002250	47.45	gold quality
frontal cortex	UBERON:0001870	47.33	gold quality
gastrocnemius	UBERON:0001388	47.21	gold quality
multicellular organism	UBERON:0000468	46.72	gold quality
heart left ventricle	UBERON:0002084	45.61	gold quality
superior frontal gyrus	UBERON:0002661	45.23	silver quality
Brodmann (1909) area 9	UBERON:0013540	45.09	gold quality
anterior cingulate cortex	UBERON:0009835	45.00	gold quality
hypothalamus	UBERON:0001898	44.61	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	44.50	gold quality
cerebral cortex	UBERON:0000956	44.47	gold quality
ascending aorta	UBERON:0001496	44.07	silver quality
heart	UBERON:0000948	43.97	gold quality
thoracic aorta	UBERON:0001515	43.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.