LINC02779

Summary

LINC02779 (long intergenic non-protein coding RNA 2779, HGNC:54299) is a long non-coding RNA gene on chromosome 1q41.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54299
Approved symbol	LINC02779
Name	long intergenic non-protein coding RNA 2779
Location	1q41
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231529
Ensembl biotype	lncRNA
Entrez	105372929
RNAcentral	URS00026A2674 — lncRNA, 2753 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000446169, ENST00000785452, ENST00000785453, ENST00000785454, ENST00000785455, ENST00000785456, ENST00000785457, ENST00000785458, ENST00000785459, ENST00000785460, ENST00000785461, ENST00000785462, ENST00000785463, ENST00000785464, ENST00000785465, ENST00000785466

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446169 — 3 exons

Exon	Start	End
ENSE00001671377	220485104	220485440
ENSE00001777423	220486991	220487183
ENSE00004161241	220487275	220487581

Expression profiles

Bgee: expression breadth broad, 25 present calls, max score 64.51.

Top tissues by expression

25 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	64.51	gold quality
left testis	UBERON:0004533	63.92	gold quality
testis	UBERON:0000473	63.57	gold quality
sural nerve	UBERON:0015488	59.89	silver quality
multicellular organism	UBERON:0000468	59.81	gold quality
islet of Langerhans	UBERON:0000006	54.17	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.50	gold quality
tibial nerve	UBERON:0001323	49.75	gold quality
monocyte	CL:0000576	49.16	silver quality
blood	UBERON:0000178	49.05	silver quality
body of pancreas	UBERON:0001150	46.88	silver quality
fallopian tube	UBERON:0003889	46.84	gold quality
tibial artery	UBERON:0007610	43.76	silver quality
lung	UBERON:0002048	42.32	gold quality
adult mammalian kidney	UBERON:0000082	42.15	silver quality
transverse colon	UBERON:0001157	40.37	silver quality
gastrocnemius	UBERON:0001388	39.28	silver quality
prostate gland	UBERON:0002367	37.61	silver quality
hypothalamus	UBERON:0001898	37.56	silver quality
upper lobe of left lung	UBERON:0008952	36.44	silver quality
pituitary gland	UBERON:0000007	36.20	silver quality
endocervix	UBERON:0000458	35.12	silver quality
substantia nigra	UBERON:0002038	34.85	silver quality
left lobe of thyroid gland	UBERON:0001120	34.51	silver quality
subcutaneous adipose tissue	UBERON:0002190	33.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.