LINC02783

Summary

LINC02783 (long intergenic non-protein coding RNA 2783, HGNC:54303) is a long non-coding RNA gene on chromosome 1p36.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54303
Approved symbol	LINC02783
Name	long intergenic non-protein coding RNA 2783
Location	1p36.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000204362
Ensembl biotype	lncRNA
Entrez	400743
RNAcentral	URS00009C6115 — lncRNA, 590 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000412427, ENST00000634972, ENST00000755420, ENST00000755421, ENST00000755422, ENST00000755423, ENST00000755424, ENST00000755425, ENST00000755426, ENST00000755427, ENST00000755428, ENST00000755429

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412427 — 3 exons

Exon	Start	End
ENSE00001467216	17192965	17193165
ENSE00001467217	17189783	17189930
ENSE00001636012	17193291	17197617

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 69.10.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3332 / max 16.7629, expressed in 169 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
985	0.3332	169

Top tissues by expression

41 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	69.10	gold quality
cortex of kidney	UBERON:0001225	65.09	gold quality
urinary bladder	UBERON:0001255	61.83	gold quality
placenta	UBERON:0001987	59.43	gold quality
endocervix	UBERON:0000458	55.04	gold quality
islet of Langerhans	UBERON:0000006	54.26	gold quality
adenohypophysis	UBERON:0002196	53.35	gold quality
lower esophagus mucosa	UBERON:0035834	52.11	gold quality
monocyte	CL:0000576	51.52	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	49.72	gold quality
kidney	UBERON:0002113	49.57	gold quality
esophagus	UBERON:0001043	49.40	gold quality
esophagus mucosa	UBERON:0002469	49.40	gold quality
blood	UBERON:0000178	47.37	silver quality
skin of leg	UBERON:0001511	45.14	gold quality
zone of skin	UBERON:0000014	45.05	gold quality
gastrocnemius	UBERON:0001388	44.43	silver quality
prostate gland	UBERON:0002367	44.41	gold quality
tibial artery	UBERON:0007610	44.35	gold quality
skin of abdomen	UBERON:0001416	44.31	gold quality
lower esophagus muscularis layer	UBERON:0035833	44.20	gold quality
spleen	UBERON:0002106	43.82	silver quality
adult mammalian kidney	UBERON:0000082	43.60	silver quality
vagina	UBERON:0000996	43.08	gold quality
left coronary artery	UBERON:0001626	42.80	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	42.26	gold quality
tibial nerve	UBERON:0001323	41.56	gold quality
right atrium auricular region	UBERON:0006631	41.24	silver quality
substantia nigra	UBERON:0002038	40.77	gold quality
subcutaneous adipose tissue	UBERON:0002190	40.62	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.