LINC02787

Summary

LINC02787 (long intergenic non-protein coding RNA 2787, HGNC:54308) is a long non-coding RNA gene on chromosome 1p22.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54308
Approved symbol	LINC02787
Name	long intergenic non-protein coding RNA 2787
Location	1p22.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229201
Ensembl biotype	lncRNA
Entrez	105378852
RNAcentral	URS0002A19F7D — lncRNA, 1634 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000435832, ENST00000779570, ENST00000779571, ENST00000779572

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435832 — 4 exons

Exon	Start	End
ENSE00001599974	90510910	90510985
ENSE00001707913	90513982	90514009
ENSE00001716551	90511987	90512008
ENSE00001801915	90533368	90533472

Expression profiles

Bgee: expression breadth broad, 28 present calls, max score 96.79.

Top tissues by expression

28 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	96.79	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.70	gold quality
cortex of kidney	UBERON:0001225	87.71	gold quality
blood	UBERON:0000178	72.88	gold quality
islet of Langerhans	UBERON:0000006	67.55	gold quality
endometrium	UBERON:0001295	67.01	gold quality
Brodmann (1909) area 9	UBERON:0013540	65.29	gold quality
placenta	UBERON:0001987	65.00	gold quality
Ammon’s horn	UBERON:0001954	59.21	gold quality
testis	UBERON:0000473	57.96	gold quality
tibial artery	UBERON:0007610	57.91	gold quality
multicellular organism	UBERON:0000468	57.56	gold quality
right testis	UBERON:0004534	57.39	gold quality
left testis	UBERON:0004533	56.87	gold quality
muscle layer of sigmoid colon	UBERON:0035805	56.73	gold quality
substantia nigra	UBERON:0002038	55.61	gold quality
tibial nerve	UBERON:0001323	52.80	gold quality
left ovary	UBERON:0002119	52.57	gold quality
prostate gland	UBERON:0002367	51.41	gold quality
vagina	UBERON:0000996	50.87	gold quality
lower esophagus muscularis layer	UBERON:0035833	49.80	gold quality
cerebellar hemisphere	UBERON:0002245	48.26	silver quality
right ovary	UBERON:0002118	47.65	gold quality
skin of leg	UBERON:0001511	47.47	gold quality
right frontal lobe	UBERON:0002810	45.81	gold quality
pituitary gland	UBERON:0000007	45.61	gold quality
right hemisphere of cerebellum	UBERON:0014890	44.78	silver quality
lung	UBERON:0002048	34.32	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.