LINC02789

Summary

LINC02789 (long intergenic non-protein coding RNA 2789, HGNC:54310) is a long non-coding RNA gene on chromosome 1q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54310
Approved symbol	LINC02789
Name	long intergenic non-protein coding RNA 2789
Location	1q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231718
Ensembl biotype	lncRNA
Entrez	400800
RNAcentral	URS00004AE46A — lncRNA, 2296 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000452199, ENST00000834620

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452199 — 4 exons

Exon	Start	End
ENSE00001662632	199391321	199393307
ENSE00001685112	199162465	199162570
ENSE00001701666	199161423	199161485
ENSE00001772390	199148598	199148737

Expression profiles

Bgee: expression breadth broad, 15 present calls, max score 79.06.

Top tissues by expression

15 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
liver	UBERON:0002107	79.06	silver quality
gastrocnemius	UBERON:0001388	52.54	silver quality
amygdala	UBERON:0001876	48.72	gold quality
adrenal gland	UBERON:0002369	47.20	silver quality
lymph node	UBERON:0000029	46.22	silver quality
small intestine Peyer’s patch	UBERON:0003454	42.25	silver quality
tibial artery	UBERON:0007610	41.89	silver quality
skin of leg	UBERON:0001511	41.11	silver quality
subcutaneous adipose tissue	UBERON:0002190	40.43	silver quality
ascending aorta	UBERON:0001496	40.23	silver quality
adipose tissue	UBERON:0001013	40.17	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	39.46	silver quality
body of stomach	UBERON:0001161	39.27	silver quality
omental fat pad	UBERON:0010414	38.75	silver quality
upper lobe of left lung	UBERON:0008952	37.11	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.