LINC02794

Summary

LINC02794 (long intergenic non-protein coding RNA 2794, HGNC:54318) is a long non-coding RNA gene on chromosome 1p33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54318
Approved symbol	LINC02794
Name	long intergenic non-protein coding RNA 2794
Location	1p33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226133
Ensembl biotype	lncRNA
Entrez	105379778
RNAcentral	URS0000061783 — lncRNA, 789 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000439795, ENST00000456803, ENST00000635446

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439795 — 3 exons

Exon	Start	End
ENSE00001721913	48066598	48067201
ENSE00001733807	48055070	48055196
ENSE00001772350	48054209	48054266

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 67.81.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	67.81	silver quality
sural nerve	UBERON:0015488	67.65	gold quality
ganglionic eminence	UBERON:0004023	63.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.86	gold quality
skeletal muscle tissue	UBERON:0001134	60.71	gold quality
calcaneal tendon	UBERON:0003701	57.80	gold quality
kidney	UBERON:0002113	57.49	gold quality
metanephros cortex	UBERON:0010533	57.49	gold quality
adult mammalian kidney	UBERON:0000082	56.57	gold quality
duodenum	UBERON:0002114	56.11	gold quality
popliteal artery	UBERON:0002250	55.68	gold quality
tibial artery	UBERON:0007610	55.57	gold quality
myometrium	UBERON:0001296	55.42	gold quality
cortex of kidney	UBERON:0001225	55.22	gold quality
urinary bladder	UBERON:0001255	54.23	gold quality
left testis	UBERON:0004533	53.71	gold quality
testis	UBERON:0000473	53.65	gold quality
vermiform appendix	UBERON:0001154	53.50	gold quality
monocyte	CL:0000576	53.39	silver quality
tonsil	UBERON:0002372	53.27	silver quality
smooth muscle tissue	UBERON:0001135	53.15	gold quality
right testis	UBERON:0004534	53.03	gold quality
right atrium auricular region	UBERON:0006631	52.19	gold quality
caudate nucleus	UBERON:0001873	51.75	gold quality
blood	UBERON:0000178	51.38	gold quality
liver	UBERON:0002107	51.07	gold quality
left coronary artery	UBERON:0001626	50.71	gold quality
right coronary artery	UBERON:0001625	50.68	gold quality
prefrontal cortex	UBERON:0000451	50.57	gold quality
primary visual cortex	UBERON:0002436	50.52	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.