LINC02796

Summary

LINC02796 (long intergenic non-protein coding RNA 2796, HGNC:27918) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27918
Approved symbol	LINC02796
Name	long intergenic non-protein coding RNA 2796
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227016
Ensembl biotype	lncRNA
Entrez	339468
RNAcentral	URS00026A1ACF — lncRNA, 980 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 49 — 49 lncRNA

ENST00000418078, ENST00000715640, ENST00000715641, ENST00000715642, ENST00000715643, ENST00000715644, ENST00000715645, ENST00000715646, ENST00000715647, ENST00000715648, ENST00000715649, ENST00000758133, ENST00000758134, ENST00000758135, ENST00000758136, ENST00000758137, ENST00000758138, ENST00000758139, ENST00000758140, ENST00000758141, ENST00000758142, ENST00000758143, ENST00000758144, ENST00000758145, ENST00000758146, ENST00000758147, ENST00000758148, ENST00000758149, ENST00000758150, ENST00000758151, ENST00000758152, ENST00000758153, ENST00000758154, ENST00000758155, ENST00000758156, ENST00000758157, ENST00000758158, ENST00000758159, ENST00000758160, ENST00000758161, ENST00000758162, ENST00000758163, ENST00000758164, ENST00000758165, ENST00000758166, ENST00000758167, ENST00000758168, ENST00000758169, ENST00000758170

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000418078 — 7 exons

Exon	Start	End
ENSE00001687483	72775272	72775544
ENSE00001743069	72780107	72780293
ENSE00001767865	72778273	72778357
ENSE00003611677	72765031	72765080
ENSE00003787191	72791065	72791282
ENSE00003787350	72786627	72786981
ENSE00004027478	72783670	72783883

Expression profiles

Bgee: expression breadth broad, 26 present calls, max score 57.29.

Top tissues by expression

159 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	57.29	silver quality
buccal mucosa cell	CL:0002336	55.17	gold quality
upper lobe of lung	UBERON:0008948	50.23	silver quality
prefrontal cortex	UBERON:0000451	48.65	gold quality
gastrocnemius	UBERON:0001388	45.82	gold quality
tibial artery	UBERON:0007610	45.31	silver quality
thyroid gland	UBERON:0002046	44.04	gold quality
aorta	UBERON:0000947	43.79	silver quality
ascending aorta	UBERON:0001496	43.55	silver quality
gall bladder	UBERON:0002110	43.37	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
cerebellar hemisphere	UBERON:0002245	43.15	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.59	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
blood	UBERON:0000178	42.18	gold quality
sperm	CL:0000019	41.98	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
vastus lateralis	UBERON:0001379	41.85	gold quality
quadriceps femoris	UBERON:0001377	41.80	gold quality
frontal cortex	UBERON:0001870	41.64	silver quality
left testis	UBERON:0004533	41.39	gold quality
neocortex	UBERON:0001950	41.38	silver quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
testis	UBERON:0000473	41.16	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	41.03	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.