LINC02802

Summary

LINC02802 (long intergenic non-protein coding RNA 2802, HGNC:54326) is a long non-coding RNA gene on chromosome 1q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54326
Approved symbol	LINC02802
Name	long intergenic non-protein coding RNA 2802
Location	1q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232527
Ensembl biotype	lncRNA
Entrez	100996732
RNAcentral	URS0002A24D8A — lncRNA, 1851 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000294715, ENST00000420597, ENST00000452399, ENST00000457390, ENST00000826216, ENST00000826217, ENST00000826218, ENST00000826219, ENST00000826220, ENST00000826221, ENST00000826222, ENST00000826223, ENST00000826224, ENST00000826225, ENST00000826226, ENST00000826227, ENST00000826228, ENST00000826229, ENST00000826230, ENST00000826231

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000294715 — 4 exons

Exon	Start	End
ENSE00003547160	144245238	144245315
ENSE00003592213	144245686	144245820
ENSE00004236889	144207475	144208475
ENSE00004236894	144250225	144250351

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 90.18.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
superior frontal gyrus	UBERON:0002661	90.18	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.89	gold quality
anterior cingulate cortex	UBERON:0009835	88.51	gold quality
temporal lobe	UBERON:0001871	88.39	gold quality
amygdala	UBERON:0001876	88.32	gold quality
prefrontal cortex	UBERON:0000451	88.28	gold quality
nucleus accumbens	UBERON:0001882	88.27	gold quality
Ammon’s horn	UBERON:0001954	88.22	gold quality
frontal cortex	UBERON:0001870	87.51	gold quality
cerebral cortex	UBERON:0000956	87.43	gold quality
putamen	UBERON:0001874	87.30	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	87.13	gold quality
placenta	UBERON:0001987	86.24	gold quality
Brodmann (1909) area 9	UBERON:0013540	86.15	gold quality
right frontal lobe	UBERON:0002810	86.08	gold quality
caudate nucleus	UBERON:0001873	86.00	gold quality
stromal cell of endometrium	CL:0002255	85.95	gold quality
mucosa of stomach	UBERON:0001199	85.94	gold quality
primary visual cortex	UBERON:0002436	84.84	gold quality
hypothalamus	UBERON:0001898	84.58	gold quality
cortical plate	UBERON:0005343	84.36	gold quality
ganglionic eminence	UBERON:0004023	83.72	gold quality
apex of heart	UBERON:0002098	83.30	gold quality
brain	UBERON:0000955	82.87	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	82.36	gold quality
lower esophagus muscularis layer	UBERON:0035833	82.07	gold quality
lower esophagus	UBERON:0013473	82.00	gold quality
substantia nigra	UBERON:0002038	81.71	gold quality
endocervix	UBERON:0000458	81.27	gold quality
subcutaneous adipose tissue	UBERON:0002190	80.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	20.88

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Long Non-Coding RNA LINC02802 Regulates In Vitro Sprouting Angiogenesis by Sponging microRNA-486-5p. (PMID:35163581)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.