LINC02809

Summary

LINC02809 (long intergenic non-protein coding RNA 2809, HGNC:54341) is a long non-coding RNA gene on chromosome 1q42.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54341
Approved symbol	LINC02809
Name	long intergenic non-protein coding RNA 2809
Location	1q42.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000276255
Ensembl biotype	lncRNA
Entrez	100506571
RNAcentral	URS00007C5849 — lncRNA, 2642 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000611237, ENST00000623471

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000611237 — 1 exons

Exon	Start	End
ENSE00003740692	228073913	228076550

Expression profiles

Bgee: expression breadth broad, 77 present calls, max score 74.23.

Top tissues by expression

188 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	74.23	gold quality
parotid gland	UBERON:0001831	72.21	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	72.02	gold quality
biceps brachii	UBERON:0001507	69.09	gold quality
tendon of biceps brachii	UBERON:0008188	67.26	gold quality
myocardium	UBERON:0002349	66.83	gold quality
dorsal motor nucleus of vagus nerve	UBERON:0002870	66.19	gold quality
inferior olivary complex	UBERON:0002127	65.96	gold quality
skeletal muscle tissue	UBERON:0001134	65.73	gold quality
heart right ventricle	UBERON:0002080	65.14	gold quality
bone marrow	UBERON:0002371	64.45	gold quality
tendon	UBERON:0000043	64.36	silver quality
cartilage tissue	UBERON:0002418	64.36	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	64.04	gold quality
secondary oocyte	CL:0000655	63.90	gold quality
cortex of kidney	UBERON:0001225	63.49	gold quality
postcentral gyrus	UBERON:0002581	62.71	gold quality
metanephros	UBERON:0000081	62.70	gold quality
endothelial cell	CL:0000115	62.68	gold quality
duodenum	UBERON:0002114	62.54	gold quality
trabecular bone tissue	UBERON:0002483	62.52	gold quality
parietal lobe	UBERON:0001872	62.18	gold quality
colonic mucosa	UBERON:0000317	61.99	gold quality
vastus lateralis	UBERON:0001379	61.90	gold quality
quadriceps femoris	UBERON:0001377	61.84	gold quality
entorhinal cortex	UBERON:0002728	61.53	gold quality
medulla oblongata	UBERON:0001896	61.44	gold quality
mammalian vulva	UBERON:0000997	61.43	gold quality
seminal vesicle	UBERON:0000998	61.36	gold quality
nephron tubule	UBERON:0001231	61.35	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.