LINC02812

Summary

LINC02812 (long intergenic non-protein coding RNA 2812, HGNC:54344) is a long non-coding RNA gene on chromosome 1p32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54344
Approved symbol	LINC02812
Name	long intergenic non-protein coding RNA 2812
Location	1p32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230138
Ensembl biotype	lncRNA
Entrez	107984957
RNAcentral	URS0002A49EF0 — lncRNA, 852 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000449958, ENST00000669809

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000449958 — 2 exons

Exon	Start	End
ENSE00004092098	53366666	53367277
ENSE00004092099	53368006	53368245

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 79.95.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2261 / max 81.3107, expressed in 63 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
12407	0.1210	50
12406	0.1051	11

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.95	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.35	gold quality
monocyte	CL:0000576	78.42	gold quality
leukocyte	CL:0000738	77.77	gold quality
lymph node	UBERON:0000029	71.69	gold quality
tonsil	UBERON:0002372	67.99	gold quality
granulocyte	CL:0000094	67.54	gold quality
bone marrow cell	CL:0002092	67.41	silver quality
vermiform appendix	UBERON:0001154	66.68	gold quality
bone marrow	UBERON:0002371	63.00	gold quality
blood	UBERON:0000178	61.33	gold quality
spleen	UBERON:0002106	60.39	gold quality
skeletal muscle tissue	UBERON:0001134	56.97	gold quality
muscle tissue	UBERON:0002385	56.38	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.05	gold quality
calcaneal tendon	UBERON:0003701	54.92	silver quality
gall bladder	UBERON:0002110	54.64	gold quality
duodenum	UBERON:0002114	53.03	gold quality
urinary bladder	UBERON:0001255	52.31	gold quality
small intestine	UBERON:0002108	51.99	gold quality
small intestine Peyer’s patch	UBERON:0003454	51.86	gold quality
liver	UBERON:0002107	51.18	gold quality
stromal cell of endometrium	CL:0002255	50.77	silver quality
prefrontal cortex	UBERON:0000451	50.45	gold quality
placenta	UBERON:0001987	50.45	gold quality
smooth muscle tissue	UBERON:0001135	49.80	gold quality
islet of Langerhans	UBERON:0000006	49.64	gold quality
myometrium	UBERON:0001296	49.10	gold quality
right coronary artery	UBERON:0001625	49.07	gold quality
cortex of kidney	UBERON:0001225	48.76	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.